Cluster: HRGMv2_3006_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3006
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3006_3 | HRGMv2_3006_3_82 | 91108 | 92160 | - | GH179 |
| TC | HRGMv2_3006_3 | HRGMv2_3006_3_83 | 92231 | 93259 | - | 3.A.1.2.15 |
| TC | HRGMv2_3006_3 | HRGMv2_3006_3_84 | 93278 | 94753 | - | 3.A.1.2.20 |
Gene ID: HRGMv2_3006_3_82
Type: CAZyme
Location: 91108 - 92160 (-)
Type: CAZyme
Location: 91108 - 92160 (-)
Gene ID: HRGMv2_3006_3_83
Type: TC
Location: 92231 - 93259 (-)
Type: TC
Location: 92231 - 93259 (-)
Gene ID: HRGMv2_3006_3_84
Type: TC
Location: 93278 - 94753 (-)
Type: TC
Location: 93278 - 94753 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp958427375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.