Cluster: HRGMv2_3006_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3006
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3006_13 | HRGMv2_3006_13_11 | 9962 | 10972 | + | 9.B.146.1.6 |
| TC | HRGMv2_3006_13 | HRGMv2_3006_13_12 | 11007 | 12164 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3006_13 | HRGMv2_3006_13_13 | 12196 | 13326 | + | GT28 |
Gene ID: HRGMv2_3006_13_11
Type: TC
Location: 9962 - 10972 (+)
Type: TC
Location: 9962 - 10972 (+)
Gene ID: HRGMv2_3006_13_12
Type: TC
Location: 11007 - 12164 (+)
Type: TC
Location: 11007 - 12164 (+)
Gene ID: HRGMv2_3006_13_13
Type: CAZyme
Location: 12196 - 13326 (+)
Type: CAZyme
Location: 12196 - 13326 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp958427375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.