Cluster: HRGMv2_3006_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3006
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3006_6 | HRGMv2_3006_6_9 | 10418 | 11251 | - | 1.A.23.4.2 |
| NULL(UNKNOWN) | HRGMv2_3006_6 | HRGMv2_3006_6_10 | 11416 | 11667 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3006_6 | HRGMv2_3006_6_11 | 12116 | 12604 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3006_6 | HRGMv2_3006_6_12 | 12708 | 14501 | - | GT39 |
Gene ID: HRGMv2_3006_6_9
Type: TC
Location: 10418 - 11251 (-)
Type: TC
Location: 10418 - 11251 (-)
Gene ID: HRGMv2_3006_6_10
Type:
Location: 11416 - 11667 (+)
Type:
Location: 11416 - 11667 (+)
Gene ID: HRGMv2_3006_6_11
Type:
Location: 12116 - 12604 (-)
Type:
Location: 12116 - 12604 (-)
Gene ID: HRGMv2_3006_6_12
Type: CAZyme
Location: 12708 - 14501 (-)
Type: CAZyme
Location: 12708 - 14501 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp958427375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.