Cluster: HRGMv2_3006_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3006
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3006_4 | HRGMv2_3006_4_30 | 32290 | 33879 | - | 9.B.142.3.8 |
| pfam | HRGMv2_3006_4 | HRGMv2_3006_4_31 | 33895 | 35415 | - | Glucos_trans_II |
| CAZyme | HRGMv2_3006_4 | HRGMv2_3006_4_32 | 35491 | 37875 | - | GH13_39 |
| CAZyme | HRGMv2_3006_4 | HRGMv2_3006_4_33 | 37863 | 39341 | - | GT5 |
Gene ID: HRGMv2_3006_4_30
Type: TC
Location: 32290 - 33879 (-)
Type: TC
Location: 32290 - 33879 (-)
Gene ID: HRGMv2_3006_4_31
Type: pfam
Location: 33895 - 35415 (-)
Type: pfam
Location: 33895 - 35415 (-)
Gene ID: HRGMv2_3006_4_32
Type: CAZyme
Location: 35491 - 37875 (-)
Type: CAZyme
Location: 35491 - 37875 (-)
Gene ID: HRGMv2_3006_4_33
Type: CAZyme
Location: 37863 - 39341 (-)
Type: CAZyme
Location: 37863 - 39341 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp958427375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.