Cluster: HRGMv2_3005_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3005
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3005_26 | HRGMv2_3005_26_15 | 17247 | 18434 | - | 2.A.86.1.8 |
| pfam | HRGMv2_3005_26 | HRGMv2_3005_26_16 | 18431 | 19669 | - | Aldedh |
| pfam | HRGMv2_3005_26 | HRGMv2_3005_26_17 | 20091 | 20879 | - | AA_kinase |
| CAZyme | HRGMv2_3005_26 | HRGMv2_3005_26_18 | 21047 | 22987 | - | GH78 |
| TC | HRGMv2_3005_26 | HRGMv2_3005_26_19 | 22977 | 25601 | - | 3.A.5.1.3 |
Gene ID: HRGMv2_3005_26_15
Type: TC
Location: 17247 - 18434 (-)
Type: TC
Location: 17247 - 18434 (-)
Gene ID: HRGMv2_3005_26_16
Type: pfam
Location: 18431 - 19669 (-)
Type: pfam
Location: 18431 - 19669 (-)
Gene ID: HRGMv2_3005_26_17
Type: pfam
Location: 20091 - 20879 (-)
Type: pfam
Location: 20091 - 20879 (-)
Gene ID: HRGMv2_3005_26_18
Type: CAZyme
Location: 21047 - 22987 (-)
Type: CAZyme
Location: 21047 - 22987 (-)
Gene ID: HRGMv2_3005_26_19
Type: TC
Location: 22977 - 25601 (-)
Type: TC
Location: 22977 - 25601 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900761625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.