Cluster: HRGMv2_3005_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3005
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3005_15 | HRGMv2_3005_15_6 | 8134 | 9879 | - | PL37 |
| TF | HRGMv2_3005_15 | HRGMv2_3005_15_7 | 9991 | 10830 | + | HTH_AraC | HTH_AraC |
| STP | HRGMv2_3005_15 | HRGMv2_3005_15_8 | 11244 | 12329 | + | Diacid_rec |
| TC | HRGMv2_3005_15 | HRGMv2_3005_15_9 | 12398 | 13072 | + | 3.A.1.140.1 |
Gene ID: HRGMv2_3005_15_6
Type: CAZyme
Location: 8134 - 9879 (-)
Type: CAZyme
Location: 8134 - 9879 (-)
Gene ID: HRGMv2_3005_15_7
Type: TF
Location: 9991 - 10830 (+)
Type: TF
Location: 9991 - 10830 (+)
Gene ID: HRGMv2_3005_15_8
Type: STP
Location: 11244 - 12329 (+)
Type: STP
Location: 11244 - 12329 (+)
Gene ID: HRGMv2_3005_15_9
Type: TC
Location: 12398 - 13072 (+)
Type: TC
Location: 12398 - 13072 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900761625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.