Cluster: HRGMv2_3001_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3001_1 | HRGMv2_3001_1_189 | 211790 | 212926 | - | GT28 |
| TC | HRGMv2_3001_1 | HRGMv2_3001_1_190 | 213000 | 214229 | - | 2.A.103.1.3 |
| TC | HRGMv2_3001_1 | HRGMv2_3001_1_191 | 214268 | 215278 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3001_1_189
Type: CAZyme
Location: 211790 - 212926 (-)
Type: CAZyme
Location: 211790 - 212926 (-)
Gene ID: HRGMv2_3001_1_190
Type: TC
Location: 213000 - 214229 (-)
Type: TC
Location: 213000 - 214229 (-)
Gene ID: HRGMv2_3001_1_191
Type: TC
Location: 214268 - 215278 (-)
Type: TC
Location: 214268 - 215278 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.