Cluster: HRGMv2_2998_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2998
- CGC Family ID: CGCFAM_07930
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2998_15 | HRGMv2_2998_15_40 | 40394 | 41782 | - | 2.A.66.1.28 |
| TF | HRGMv2_2998_15 | HRGMv2_2998_15_41 | 41958 | 42860 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_2998_15 | HRGMv2_2998_15_42 | 42857 | 44446 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2998_15 | HRGMv2_2998_15_43 | 44511 | 46355 | - | GH13_39 |
| CAZyme | HRGMv2_2998_15 | HRGMv2_2998_15_44 | 46436 | 47581 | - | GT35 |
Gene ID: HRGMv2_2998_15_40
Type: TC
Location: 40394 - 41782 (-)
Type: TC
Location: 40394 - 41782 (-)
Gene ID: HRGMv2_2998_15_41
Type: TF
Location: 41958 - 42860 (+)
Type: TF
Location: 41958 - 42860 (+)
Gene ID: HRGMv2_2998_15_42
Type:
Location: 42857 - 44446 (+)
Type:
Location: 42857 - 44446 (+)
Gene ID: HRGMv2_2998_15_43
Type: CAZyme
Location: 44511 - 46355 (-)
Type: CAZyme
Location: 44511 - 46355 (-)
Gene ID: HRGMv2_2998_15_44
Type: CAZyme
Location: 46436 - 47581 (-)
Type: CAZyme
Location: 46436 - 47581 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella excrementavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.