PROTEIN: HRGMv2_2998_15_42
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Protein File & Metadata
Source:
HRGMv2_2998_15_42.pdb
Genome ID:
Protein ID:
HRGMv2_2998_15_42
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Protein Sequence
MNPAGKTEGK TGALRRFSAL WLLLPAAGVL AVVSRSSPFY AVNNWSDAQC FFLMGKAMAQ 60 GRVLYVDAVD QKGPLLFFLH CIANWVQADG FLGVWLIEIA AAALFLYFAW RLFLLCGAGR 120 AAALAPALVL AVSYSTVAFQ KGDSAEELCL PLLLGGVELG LETLRLRRPL TLRLGLALGL 180 LCGAVFWIKY NLCAPFGAVA LVLLAWGLAR RDWKGLGRVV LGGVLGLAAM SLPWLFYFWV 240 NGALDEMLYN YFYCNLFLYS DSADAALPQM LASMWRNIRS DLRLNWVFGV FVVLGLLWFT 300 FGPGARGEKR DAAFWLQRLL VPLSFLAVTA AIYGTPHNVP IYYALALVLF VPFGFVPVLA 360 AVRAVVDKLA GTGRFSSWLW AALAAAALAA GVGFAWWHTP NHQAFGQKRA DTVQYQFAQV 420 MRSEPDPSYE MWGVLDRGFG MAADLLENSP YIGDFNLPLE EAQQAHYGEP VFDTEFIICG 480 SYEDDYQTNL AQWQPLLEQH GYVQVGEGQE LQLNRKTYYT VRYLLYQRQ 529
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HY61-F1-model_v4 | 13 | 529 | 2 | 546 | 0.695 |
0.7413 |
| AF-Q9HUZ2-F1-model_v4 | 17 | 529 | 8 | 474 | 0.6861 |
0.7561 |
| AF-A0A0H3GZQ8-F1-model_v4 | 14 | 529 | 3 | 550 | 0.6856 |
0.7339 |
| AF-O52327-F1-model_v4 | 10 | 529 | 1 | 545 | 0.6795 |
0.7197 |
| AF-P76473-F1-model_v4 | 10 | 529 | 1 | 549 | 0.6793 |
0.7227 |
| AF-Q32DT1-F1-model_v4 | 10 | 529 | 1 | 549 | 0.6764 |
0.72 |
| AF-K0EVQ0-F1-model_v4 | 7 | 529 | 1 | 551 | 0.6738 |
0.7142 |
| AF-Q8CZ87-F1-model_v4 | 14 | 529 | 37 | 518 | 0.6704 |
0.7438 |
| AF-K0EN63-F1-model_v4 | 14 | 527 | 1 | 540 | 0.6637 |
0.7097 |
| AF-A0A175VYA5-F1-model_v4 | 1 | 529 | 21 | 611 | 0.6537 |
0.7186 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-G7URS4-F1-model_v4 | GT83 | 6 | 529 | 5 | 497 | 0.7193 |
0.7721 |
| UNK49813.1 | GT83 | 13 | 529 | 18 | 508 | 0.7177 |
0.7765 |
| AF-A0A0A8DXT4-F1-model_v4 | GT83 | 13 | 529 | 3 | 492 | 0.7138 |
0.7709 |
| AF-A0A0X8KBH9-F1-model_v4 | GT83 | 13 | 529 | 2 | 483 | 0.7104 |
0.7653 |
| AF-A0A7D4HYD7-F1-model_v4 | GT83 | 2 | 529 | 2 | 509 | 0.7086 |
0.7543 |
| AF-E3HFB3-F1-model_v4 | GT83 | 1 | 529 | 1 | 509 | 0.7085 |
0.7534 |
| AF-A0A0U3EJ09-F1-model_v4 | GT83 | 13 | 529 | 1 | 495 | 0.7065 |
0.7522 |
| AF-A0A858ZP41-F1-model_v4 | GT83 | 1 | 529 | 2 | 500 | 0.7051 |
0.7526 |
| A0A3M4VJW3 | GT83 | 11 | 529 | 2 | 487 | 0.7047 |
0.7588 |
| AF-A0A3G8GHA9-F1-model_v4 | GT83 | 14 | 529 | 1 | 497 | 0.7047 |
0.758 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A518AYL4 | GT83 | 7 | 529 | 2 | 482 | 0.739 |
0.8013 |
| A0A2Z4Y6P6 | GT83 | 10 | 529 | 3 | 495 | 0.723 |
0.7709 |
| UNK49813.1 | GT83 | 13 | 529 | 18 | 508 | 0.7177 |
0.7765 |
| A0A6C2YNQ2 | GT83 | 1 | 529 | 9 | 502 | 0.717 |
0.7708 |
| A0A9C7C541 | GT83 | 13 | 529 | 5 | 493 | 0.7166 |
0.77 |
| A0A2I6S4K6 | GT83 | 14 | 529 | 7 | 488 | 0.7164 |
0.7799 |
| K4R0C6 | GT83 | 7 | 529 | 16 | 476 | 0.7163 |
0.7936 |
| A0A1C1W1J0 | GT83 | 13 | 529 | 6 | 504 | 0.7125 |
0.7611 |
| BCT95651.1 | GT83 | 14 | 529 | 1 | 482 | 0.7113 |
0.772 |
| A0A127JPD6 | GT83 | 6 | 529 | 1 | 501 | 0.7106 |
0.7645 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 10 | 529 | 1 | 534 | 0.6952 |
0.7331 |
| 5ezm-assembly1.cif.gz_A | 10 | 529 | 1 | 530 | 0.6894 |
0.7246 |
| 7zlh-assembly1.cif.gz_A | 6 | 529 | 4 | 654 | 0.5988 |
0.6837 |
| 7zlg-assembly1.cif.gz_A | 6 | 529 | 4 | 662 | 0.5974 |
0.6843 |
| 8agb-assembly1.cif.gz_A | 4 | 529 | 1 | 607 | 0.5921 |
0.6666 |
| 6ezn-assembly1.cif.gz_F | 7 | 529 | 4 | 615 | 0.592 |
0.6739 |
| 6ftg-assembly1.cif.gz_5 | 9 | 529 | 13 | 643 | 0.5825 |
0.6634 |
| 6gxc-assembly1.cif.gz_A | 10 | 529 | 10 | 706 | 0.5817 |
0.6869 |
| 8b6l-assembly1.cif.gz_I | 9 | 529 | 4 | 675 | 0.5816 |
0.679 |
| 5ogl-assembly1.cif.gz_A | 10 | 529 | 10 | 707 | 0.5807 |
0.6861 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3KCB9-F1-model_v4 | 13 | 529 | 2 | 546 | 0.7019 |
0.7474 |
| AF-Q4KC80-F1-model_v4 | 13 | 529 | 3 | 546 | 0.6991 |
0.7452 |
| AF-Q4ZSZ0-F1-model_v4 | 10 | 529 | 1 | 547 | 0.6975 |
0.7404 |
| AF-A6V1N8-F1-model_v4 | 13 | 529 | 2 | 546 | 0.6955 |
0.7418 |
| AF-Q9HY61-F1-model_v4 | 13 | 529 | 2 | 546 | 0.695 |
0.7413 |
| AF-Q02R27-F1-model_v4 | 13 | 529 | 2 | 546 | 0.6948 |
0.7413 |
| AF-B7VBN0-F1-model_v4 | 13 | 529 | 2 | 546 | 0.6947 |
0.741 |
| AF-Q1MJ97-F1-model_v4 | 7 | 529 | 1 | 491 | 0.6917 |
0.7415 |
| AF-A9R091-F1-model_v4 | 9 | 529 | 1 | 552 | 0.691 |
0.735 |
| AF-Q7N3Q9-F1-model_v4 | 7 | 529 | 1 | 551 | 0.6901 |
0.7311 |