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Cluster: HRGMv2_2998_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2998_3 HRGMv2_2998_3_165 173464 174210 - CE14
TC HRGMv2_2998_3 HRGMv2_2998_3_166 174221 175558 - 2.A.2.3.4
TF HRGMv2_2998_3 HRGMv2_2998_3_167 175717 176424 + LytTR
pfam HRGMv2_2998_3 HRGMv2_2998_3_168 176421 177704 + HATPase_c_5
CAZyme HRGMv2_2998_3 HRGMv2_2998_3_169 177976 181020 + GH3
NULL(UNKNOWN) HRGMv2_2998_3 HRGMv2_2998_3_170 181051 182094 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2998_3 HRGMv2_2998_3_171 182187 183797 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2998_3 HRGMv2_2998_3_172 183847 186036 + GH3
Gene ID: HRGMv2_2998_3_165
Type: CAZyme
Location: 173464 - 174210 (-)
Gene ID: HRGMv2_2998_3_166
Type: TC
Location: 174221 - 175558 (-)
Gene ID: HRGMv2_2998_3_167
Type: TF
Location: 175717 - 176424 (+)
Gene ID: HRGMv2_2998_3_168
Type: pfam
Location: 176421 - 177704 (+)
Gene ID: HRGMv2_2998_3_169
Type: CAZyme
Location: 177976 - 181020 (+)
Gene ID: HRGMv2_2998_3_170
Type:
Location: 181051 - 182094 (+)
Gene ID: HRGMv2_2998_3_171
Type:
Location: 182187 - 183797 (+)
Gene ID: HRGMv2_2998_3_172
Type: CAZyme
Location: 183847 - 186036 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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