PROTEIN: HRGMv2_2998_3_171
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Protein File & Metadata
Source:
HRGMv2_2998_3_171.pdb
Genome ID:
Protein ID:
HRGMv2_2998_3_171
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Protein Sequence
MEQTTKAKGL DAFFGITRRG STVGREICAG LLMGILSVCG IFMNMQLMSA NLLTGDSVAA 60 NGETIAGLYF FSMLAAFAGS LLIGLVTRLP LVQASGLGLG SVLISMAGAA EGLTYYNLLL 120 VSLLSAAVCA LVLAVPALWR GLWAAVPEPV RRAVPAAAGL LLAWNALQLT GVVAVGATAQ 180 PTYGVGAVLE QVSSSVSAPA FVPFSSFSYA TDKFHPLMLL SALSVLLAFA VWLYCRRRSP 240 RPYLNALLAG TAFFLLTNLC FVCVNWKNFG MSLDSLWGRL WAVGSEDALH HHFYAIFSQF 300 APARVLTEGL DFSAYAAAGG SPALFVVTGV ITMAFTSLFD AKAVFEGTAA QAGQERENDR 360 TALLCGAVCG VAAPLVGVGP LGLSKASVAG AGDGARTGLA SVSAALVQLI SAFVWVVPFF 420 FATLYSYDIK FTMYGHYGET LQALSQCSFA VADAVMVIVG LSMAVRAMGI RWDDAAQAAP 480 FAVTAAAAFF LSSLTAGVAA GSLAWLLTAA GKEQRPTAAR WVWSAVSAAL LVLAMW 536
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZKG2-F1-model_v4 | 2 | 536 | 5 | 449 | 0.7977 |
0.8872 |
| AF-K0EUK6-F1-model_v4 | 6 | 536 | 16 | 475 | 0.7797 |
0.8688 |
| AF-Q0P8P0-F1-model_v4 | 8 | 536 | 1 | 439 | 0.7431 |
0.8322 |
| AF-A0A077Z937-F1-model_v4 | 9 | 536 | 1 | 432 | 0.7403 |
0.8352 |
| AF-O25789-F1-model_v4 | 8 | 536 | 1 | 435 | 0.7389 |
0.8312 |
| AF-K0EP80-F1-model_v4 | 5 | 536 | 8 | 453 | 0.7308 |
0.8205 |
| AF-A0A0H3H0H6-F1-model_v4 | 5 | 536 | 10 | 445 | 0.7299 |
0.8287 |
| AF-Q2FW04-F1-model_v4 | 49 | 536 | 1 | 392 | 0.7264 |
0.8516 |
| AF-A0A132Z672-F1-model_v4 | 4 | 536 | 2 | 434 | 0.724 |
0.8213 |
| AF-Q57772-F1-model_v4 | 4 | 536 | 3 | 436 | 0.7238 |
0.818 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xls-assembly1.cif.gz_A-2 | 16 | 518 | 1 | 408 | 0.698 |
0.8059 |
| 3qe7-assembly1.cif.gz_A | 11 | 515 | 3 | 407 | 0.6606 |
0.7683 |
| 8crq-assembly1.cif.gz_C | 11 | 515 | 22 | 503 | 0.6457 |
0.7186 |
| 5i6c-assembly1.cif.gz_B | 1 | 513 | 1 | 468 | 0.6416 |
0.7022 |
| 7tya-assembly1.cif.gz_B | 10 | 514 | 24 | 503 | 0.6381 |
0.712 |
| 5iof-assembly1.cif.gz_A | 8 | 516 | 4 | 374 | 0.6379 |
0.771 |
| 5i6c-assembly1.cif.gz_A | 1 | 513 | 1 | 480 | 0.6345 |
0.6868 |
| 8gv8-assembly1.cif.gz_B | 10 | 514 | 23 | 500 | 0.6327 |
0.7084 |
| 7ytw-assembly1.cif.gz_A | 8 | 516 | 4 | 475 | 0.6182 |
0.6959 |
| 5da0-assembly1.cif.gz_A | 9 | 518 | 4 | 377 | 0.5788 |
0.7695 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57772-F1-model_v4 | 4 | 536 | 3 | 436 | 0.7238 |
0.818 |
| AF-P31466-F1-model_v4 | 5 | 536 | 10 | 445 | 0.7218 |
0.8203 |
| AF-O34987-F1-model_v4 | 6 | 536 | 1 | 440 | 0.719 |
0.8074 |
| AF-A0A2A5K5H4-F1-model_v4 | 4 | 536 | 4 | 440 | 0.7107 |
0.8044 |
| AF-Q9SRK7-F1-model_v4 | 1 | 518 | 18 | 550 | 0.7094 |
0.7729 |
| AF-P31440-F1-model_v4 | 2 | 536 | 9 | 444 | 0.7093 |
0.8058 |
| AF-Q84MA8-F1-model_v4 | 1 | 517 | 13 | 503 | 0.7013 |
0.7734 |
| AF-P44530-F1-model_v4 | 4 | 536 | 1 | 438 | 0.6982 |
0.7861 |
| AF-P0AF53-F1-model_v4 | 3 | 536 | 6 | 448 | 0.687 |
0.7753 |
| AF-P0AF52-F1-model_v4 | 3 | 536 | 6 | 448 | 0.6865 |
0.7748 |