Cluster: HRGMv2_2994_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2994
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2994_20 | HRGMv2_2994_20_9 | 8790 | 9806 | + | 9.B.157.1.1 |
| pfam | HRGMv2_2994_20 | HRGMv2_2994_20_10 | 9956 | 10321 | + | Hpt |
| peptidase | HRGMv2_2994_20 | HRGMv2_2994_20_11 | 10337 | 11911 | + | I87.UPW |
| CAZyme | HRGMv2_2994_20 | HRGMv2_2994_20_12 | 12222 | 14108 | - | GH13_39 |
| CAZyme | HRGMv2_2994_20 | HRGMv2_2994_20_13 | 14235 | 16652 | - | GT35 |
Gene ID: HRGMv2_2994_20_9
Type: TC
Location: 8790 - 9806 (+)
Type: TC
Location: 8790 - 9806 (+)
Gene ID: HRGMv2_2994_20_10
Type: pfam
Location: 9956 - 10321 (+)
Type: pfam
Location: 9956 - 10321 (+)
Gene ID: HRGMv2_2994_20_11
Type: peptidase
Location: 10337 - 11911 (+)
Type: peptidase
Location: 10337 - 11911 (+)
Gene ID: HRGMv2_2994_20_12
Type: CAZyme
Location: 12222 - 14108 (-)
Type: CAZyme
Location: 12222 - 14108 (-)
Gene ID: HRGMv2_2994_20_13
Type: CAZyme
Location: 14235 - 16652 (-)
Type: CAZyme
Location: 14235 - 16652 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.