Cluster: HRGMv2_2994_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2994
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2994_15 | HRGMv2_2994_15_2 | 837 | 2114 | - | GH27 |
| pfam | HRGMv2_2994_15 | HRGMv2_2994_15_3 | 2251 | 3414 | - | Cons_hypoth95 | tRNA_U5-meth_tr | Methyltransf_15 | Methyltransf_31 |
| TF | HRGMv2_2994_15 | HRGMv2_2994_15_4 | 3562 | 3807 | - | HTH_3 |
| TC | HRGMv2_2994_15 | HRGMv2_2994_15_5 | 4154 | 5611 | + | 2.A.86.1.8 |
| pfam | HRGMv2_2994_15 | HRGMv2_2994_15_6 | 5817 | 7334 | + | FapA | FapA_N |
| NULL(UNKNOWN) | HRGMv2_2994_15 | HRGMv2_2994_15_7 | 7408 | 7962 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2994_15 | HRGMv2_2994_15_8 | 7962 | 11366 | + | GH2 |
Gene ID: HRGMv2_2994_15_2
Type: CAZyme
Location: 837 - 2114 (-)
Type: CAZyme
Location: 837 - 2114 (-)
Gene ID: HRGMv2_2994_15_3
Type: pfam
Location: 2251 - 3414 (-)
Type: pfam
Location: 2251 - 3414 (-)
Gene ID: HRGMv2_2994_15_4
Type: TF
Location: 3562 - 3807 (-)
Type: TF
Location: 3562 - 3807 (-)
Gene ID: HRGMv2_2994_15_5
Type: TC
Location: 4154 - 5611 (+)
Type: TC
Location: 4154 - 5611 (+)
Gene ID: HRGMv2_2994_15_6
Type: pfam
Location: 5817 - 7334 (+)
Type: pfam
Location: 5817 - 7334 (+)
Gene ID: HRGMv2_2994_15_7
Type:
Location: 7408 - 7962 (+)
Type:
Location: 7408 - 7962 (+)
Gene ID: HRGMv2_2994_15_8
Type: CAZyme
Location: 7962 - 11366 (+)
Type: CAZyme
Location: 7962 - 11366 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.