Cluster: HRGMv2_2994_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2994
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2994_6 | HRGMv2_2994_6_39 | 45156 | 46214 | + | CE2 |
| pfam | HRGMv2_2994_6 | HRGMv2_2994_6_40 | 46520 | 47569 | + | ABC_sub_bind |
| TC | HRGMv2_2994_6 | HRGMv2_2994_6_41 | 47799 | 48833 | + | 3.A.1.34.1 |
| TC | HRGMv2_2994_6 | HRGMv2_2994_6_42 | 48835 | 49638 | + | 3.A.1.34.1 |
Gene ID: HRGMv2_2994_6_39
Type: CAZyme
Location: 45156 - 46214 (+)
Type: CAZyme
Location: 45156 - 46214 (+)
Gene ID: HRGMv2_2994_6_40
Type: pfam
Location: 46520 - 47569 (+)
Type: pfam
Location: 46520 - 47569 (+)
Gene ID: HRGMv2_2994_6_41
Type: TC
Location: 47799 - 48833 (+)
Type: TC
Location: 47799 - 48833 (+)
Gene ID: HRGMv2_2994_6_42
Type: TC
Location: 48835 - 49638 (+)
Type: TC
Location: 48835 - 49638 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.