Cluster: HRGMv2_2994_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2994
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2994_110 | HRGMv2_2994_110_1 | 205 | 2295 | + | GH31_4 |
| TF | HRGMv2_2994_110 | HRGMv2_2994_110_2 | 2295 | 2945 | + | SfsA |
| pfam | HRGMv2_2994_110 | HRGMv2_2994_110_3 | 2981 | 4057 | - | Pro_isomerase | Pro_isomerase |
| TC | HRGMv2_2994_110 | HRGMv2_2994_110_4 | 4082 | 4984 | - | 3.D.1.8.1 |
Gene ID: HRGMv2_2994_110_1
Type: CAZyme
Location: 205 - 2295 (+)
Type: CAZyme
Location: 205 - 2295 (+)
Gene ID: HRGMv2_2994_110_2
Type: TF
Location: 2295 - 2945 (+)
Type: TF
Location: 2295 - 2945 (+)
Gene ID: HRGMv2_2994_110_3
Type: pfam
Location: 2981 - 4057 (-)
Type: pfam
Location: 2981 - 4057 (-)
Gene ID: HRGMv2_2994_110_4
Type: TC
Location: 4082 - 4984 (-)
Type: TC
Location: 4082 - 4984 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.