Cluster: HRGMv2_2994_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2994
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2994_82 | HRGMv2_2994_82_4 | 3882 | 4523 | - | CE4 |
| CAZyme | HRGMv2_2994_82 | HRGMv2_2994_82_5 | 4989 | 6602 | + | GH25 |
| TC | HRGMv2_2994_82 | HRGMv2_2994_82_6 | 6896 | 8662 | - | 2.A.58.2.2 |
| STP | HRGMv2_2994_82 | HRGMv2_2994_82_7 | 8976 | 9689 | + | Peptidase_M23 |
| pfam | HRGMv2_2994_82 | HRGMv2_2994_82_8 | 9763 | 10197 | + | Tyr_Deacylase |
| CAZyme | HRGMv2_2994_82 | HRGMv2_2994_82_9 | 10231 | 11709 | - | CBM91 | GH43_12 |
Gene ID: HRGMv2_2994_82_4
Type: CAZyme
Location: 3882 - 4523 (-)
Type: CAZyme
Location: 3882 - 4523 (-)
Gene ID: HRGMv2_2994_82_5
Type: CAZyme
Location: 4989 - 6602 (+)
Type: CAZyme
Location: 4989 - 6602 (+)
Gene ID: HRGMv2_2994_82_6
Type: TC
Location: 6896 - 8662 (-)
Type: TC
Location: 6896 - 8662 (-)
Gene ID: HRGMv2_2994_82_7
Type: STP
Location: 8976 - 9689 (+)
Type: STP
Location: 8976 - 9689 (+)
Gene ID: HRGMv2_2994_82_8
Type: pfam
Location: 9763 - 10197 (+)
Type: pfam
Location: 9763 - 10197 (+)
Gene ID: HRGMv2_2994_82_9
Type: CAZyme
Location: 10231 - 11709 (-)
Type: CAZyme
Location: 10231 - 11709 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.