dbCAN Logo

Cluster: HRGMv2_2994_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2994_51 HRGMv2_2994_51_1 139 1368 + 3.A.1.4.10
TC HRGMv2_2994_51 HRGMv2_2994_51_2 1759 2688 + 3.A.1.4.10
TC HRGMv2_2994_51 HRGMv2_2994_51_3 2701 3783 + 3.A.1.4.8
TC HRGMv2_2994_51 HRGMv2_2994_51_4 3776 4543 + 3.A.1.4.10
TC HRGMv2_2994_51 HRGMv2_2994_51_5 4557 5267 + 3.A.1.4.10
TC HRGMv2_2994_51 HRGMv2_2994_51_6 5280 5912 + 2.A.115.2.14
CAZyme HRGMv2_2994_51 HRGMv2_2994_51_7 6168 7571 - GH26
NULL(UNKNOWN) HRGMv2_2994_51 HRGMv2_2994_51_8 7582 7785 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2994_51 HRGMv2_2994_51_9 7785 8987 - GH27
STP HRGMv2_2994_51 HRGMv2_2994_51_10 9256 9501 + FeoA
TC HRGMv2_2994_51 HRGMv2_2994_51_11 9485 11605 + 9.A.8.1.5
TC HRGMv2_2994_51 HRGMv2_2994_51_12 11835 12164 - 2.A.78.1.1
TC HRGMv2_2994_51 HRGMv2_2994_51_13 12161 12880 - 2.A.78.1.1
TF HRGMv2_2994_51 HRGMv2_2994_51_14 13206 13952 + HTH_DeoR
STP HRGMv2_2994_51 HRGMv2_2994_51_15 13952 14854 + PfkB
TC HRGMv2_2994_51 HRGMv2_2994_51_16 14879 16804 + 4.A.2.1.20
TC HRGMv2_2994_51 HRGMv2_2994_51_17 16944 17210 + 8.A.8.1.6
TC HRGMv2_2994_51 HRGMv2_2994_51_18 17384 19009 + 8.A.7.1.1
Gene ID: HRGMv2_2994_51_1
Type: TC
Location: 139 - 1368 (+)
Gene ID: HRGMv2_2994_51_2
Type: TC
Location: 1759 - 2688 (+)
Gene ID: HRGMv2_2994_51_3
Type: TC
Location: 2701 - 3783 (+)
Gene ID: HRGMv2_2994_51_4
Type: TC
Location: 3776 - 4543 (+)
Gene ID: HRGMv2_2994_51_5
Type: TC
Location: 4557 - 5267 (+)
Gene ID: HRGMv2_2994_51_6
Type: TC
Location: 5280 - 5912 (+)
Gene ID: HRGMv2_2994_51_7
Type: CAZyme
Location: 6168 - 7571 (-)
Gene ID: HRGMv2_2994_51_8
Type:
Location: 7582 - 7785 (-)
Gene ID: HRGMv2_2994_51_9
Type: CAZyme
Location: 7785 - 8987 (-)
Gene ID: HRGMv2_2994_51_10
Type: STP
Location: 9256 - 9501 (+)
Gene ID: HRGMv2_2994_51_11
Type: TC
Location: 9485 - 11605 (+)
Gene ID: HRGMv2_2994_51_12
Type: TC
Location: 11835 - 12164 (-)
Gene ID: HRGMv2_2994_51_13
Type: TC
Location: 12161 - 12880 (-)
Gene ID: HRGMv2_2994_51_14
Type: TF
Location: 13206 - 13952 (+)
Gene ID: HRGMv2_2994_51_15
Type: STP
Location: 13952 - 14854 (+)
Gene ID: HRGMv2_2994_51_16
Type: TC
Location: 14879 - 16804 (+)
Gene ID: HRGMv2_2994_51_17
Type: TC
Location: 16944 - 17210 (+)
Gene ID: HRGMv2_2994_51_18
Type: TC
Location: 17384 - 19009 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2994_51_8 vegetarian > vegan 1.02596 0.00226
HRGMv2_2994_51_13 vegetarian > vegan 1.41546 0.00226
HRGMv2_2994_51_14 vegetarian > vegan 2.41779 0.00226

🧭 Explore Read Mapping of CGC

← Back to Cluster List