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Cluster: HRGMv2_2994_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2994_48 HRGMv2_2994_48_11 7332 8189 + 2.A.7.2.1
TC HRGMv2_2994_48 HRGMv2_2994_48_12 8267 9940 - 1.B.52.2.2
CAZyme HRGMv2_2994_48 HRGMv2_2994_48_13 10215 11525 + GH43_35
pfam HRGMv2_2994_48 HRGMv2_2994_48_14 11692 13782 - Gln-synt_C | GSIII_N | Gln-synt_C-ter
TC HRGMv2_2994_48 HRGMv2_2994_48_15 14104 14898 - 3.A.1.3.15
TC HRGMv2_2994_48 HRGMv2_2994_48_16 14912 15559 - 3.A.1.3.14
TC HRGMv2_2994_48 HRGMv2_2994_48_17 15631 16524 - 3.A.1.3.11
Gene ID: HRGMv2_2994_48_11
Type: TC
Location: 7332 - 8189 (+)
Gene ID: HRGMv2_2994_48_12
Type: TC
Location: 8267 - 9940 (-)
Gene ID: HRGMv2_2994_48_13
Type: CAZyme
Location: 10215 - 11525 (+)
Gene ID: HRGMv2_2994_48_14
Type: pfam
Location: 11692 - 13782 (-)
Gene ID: HRGMv2_2994_48_15
Type: TC
Location: 14104 - 14898 (-)
Gene ID: HRGMv2_2994_48_16
Type: TC
Location: 14912 - 15559 (-)
Gene ID: HRGMv2_2994_48_17
Type: TC
Location: 15631 - 16524 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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