Cluster: HRGMv2_2990_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2990
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2990_10 | HRGMv2_2990_10_5 | 3946 | 5385 | - | 2.A.38.1.1 |
| TC | HRGMv2_2990_10 | HRGMv2_2990_10_6 | 5382 | 6737 | - | 2.A.38.1.1 |
| TF | HRGMv2_2990_10 | HRGMv2_2990_10_7 | 6907 | 7287 | - | Fe_dep_repress |
| NULL(UNKNOWN) | HRGMv2_2990_10 | HRGMv2_2990_10_8 | 7515 | 8597 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2990_10 | HRGMv2_2990_10_9 | 8858 | 10165 | + | CBM50 |
Gene ID: HRGMv2_2990_10_5
Type: TC
Location: 3946 - 5385 (-)
Type: TC
Location: 3946 - 5385 (-)
Gene ID: HRGMv2_2990_10_6
Type: TC
Location: 5382 - 6737 (-)
Type: TC
Location: 5382 - 6737 (-)
Gene ID: HRGMv2_2990_10_7
Type: TF
Location: 6907 - 7287 (-)
Type: TF
Location: 6907 - 7287 (-)
Gene ID: HRGMv2_2990_10_8
Type:
Location: 7515 - 8597 (+)
Type:
Location: 7515 - 8597 (+)
Gene ID: HRGMv2_2990_10_9
Type: CAZyme
Location: 8858 - 10165 (+)
Type: CAZyme
Location: 8858 - 10165 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UBA644
Genus
HGM12619
Species
HGM12619 sp900753195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.