PROTEIN: HRGMv2_2990_10_8
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Protein File & Metadata
Source:
HRGMv2_2990_10_8.pdb
Genome ID:
Protein ID:
HRGMv2_2990_10_8
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Protein Sequence
MQIFDIAVVG GGPAGSAFAM GLDKRFSVAL IDLKTGHGSF FRKPCGGLLS PDAQKILGEL 60 GLTVPESVFV PPQLFSVRTL DVRSGIVRRY RRMYLNVDRH GFDMWLRGLA EEKAVVYEGS 120 KAVSVSRVCI EEKSVFEISF VRDGKRESIF ARCVTGADGA NSVVRKFLGK RLRTRRYIAI 180 QQQFSSDRPD PFYSCVFDSS ATDCYSWGLH KSDRFIFGGA YPVNGCREAF ERQKNILTGY 240 GFTFGEPVLT EGCMVLRPSG FSSFDTGKDG VFFIGEAGGF ISPSSLEGIS SAIITGTELA 300 SAFNSVKDFD LISVRKKYRR AVLPLKIKLT AKLLKCPFMY NPFLRKLVMA SGIMGLRDSK 360
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P31456-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9333 |
0.9553 |
| AF-Q329C3-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9299 |
0.9522 |
| AF-Q57952-F1-model_v4 | 1 | 357 | 5 | 365 | 0.8049 |
0.862 |
| AF-A0A077Z522-F1-model_v4 | 1 | 335 | 1 | 285 | 0.8036 |
0.9097 |
| AF-Q58915-F1-model_v4 | 1 | 356 | 3 | 352 | 0.8013 |
0.8681 |
| AF-K7KB36-F1-model_v4 | 2 | 356 | 39 | 402 | 0.7659 |
0.8722 |
| AF-A0A1D6MQC2-F1-model_v4 | 3 | 356 | 29 | 394 | 0.7643 |
0.8703 |
| AF-Q5NB98-F1-model_v4 | 3 | 356 | 32 | 398 | 0.7535 |
0.8678 |
| AF-Q46904-F1-model_v4 | 1 | 352 | 1 | 382 | 0.7508 |
0.8448 |
| AF-K0EVA3-F1-model_v4 | 2 | 356 | 2 | 368 | 0.7504 |
0.8033 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8S2A986 | GT2 | 1 | 355 | 564 | 942 | 0.5322 |
0.789 |
| UKZ76834.1 | GH93 | 1 | 356 | 1 | 384 | 0.532 |
0.7747 |
| UST52912.1 | GT1 | 1 | 356 | 439 | 782 | 0.5261 |
0.7705 |
| WIA13184.1 | GH13_18 | 3 | 357 | 1 | 439 | 0.5236 |
0.7858 |
| AF-B8GDB7-F1-model_v4 | GT2 | 2 | 328 | 1 | 580 | 0.5075 |
0.7427 |
| AF-A0A5B8N322-F1-model_v4 | GT4 | 1 | 311 | 393 | 742 | 0.502 |
0.7779 |
| AF-A0A7I7NKQ7-F1-model_v4 | GH15 | 16 | 354 | 1 | 355 | 0.4961 |
0.7937 |
| AF-A0A517L0X3-F1-model_v4 | CE5 | 9 | 356 | 4 | 670 | 0.4875 |
0.7224 |
| AF-A0A212PKV0-F1-model_v4 | GT4 | 1 | 313 | 387 | 847 | 0.4838 |
0.777 |
| A0A8H8LWB7 | GH55 | 1 | 355 | 5 | 462 | 0.4749 |
0.7792 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5K1JRB7 | GT8 | 2 | 356 | 430 | 820 | 0.5627 |
0.7998 |
| A0A8S2A986 | GT2 | 1 | 355 | 564 | 942 | 0.5322 |
0.789 |
| UKZ76834.1 | GH93 | 1 | 356 | 1 | 384 | 0.532 |
0.7747 |
| UST52912.1 | GT1 | 1 | 356 | 439 | 782 | 0.5261 |
0.7705 |
| WIA13184.1 | GH13_18 | 3 | 357 | 1 | 439 | 0.5236 |
0.7858 |
| B8GDB7 | GT2 | 2 | 328 | 1 | 580 | 0.5075 |
0.7427 |
| A0A5B9W5P0 | GT4 | 1 | 328 | 375 | 841 | 0.5045 |
0.7855 |
| A0A5B8N322 | GT4 | 1 | 311 | 393 | 742 | 0.502 |
0.7779 |
| A0A7I7NKQ7 | GH15 | 16 | 354 | 1 | 355 | 0.4961 |
0.7937 |
| A0A9Q8Z276 | AA3_2 | 1 | 317 | 28 | 598 | 0.4875 |
0.6866 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3oz2-assembly1.cif.gz_A | 1 | 357 | 2 | 370 | 0.8003 |
0.8631 |
| 3atr-assembly1.cif.gz_A | 1 | 356 | 3 | 374 | 0.757 |
0.8655 |
| 4opi-assembly1.cif.gz_A | 1 | 356 | 3 | 374 | 0.7553 |
0.8637 |
| 4opu-assembly1.cif.gz_A | 1 | 356 | 3 | 374 | 0.7552 |
0.8637 |
| 4opt-assembly1.cif.gz_A | 1 | 356 | 3 | 374 | 0.7538 |
0.8621 |
| 4opl-assembly1.cif.gz_A | 1 | 356 | 3 | 374 | 0.7531 |
0.8614 |
| 4opg-assembly1.cif.gz_A | 1 | 356 | 3 | 374 | 0.7529 |
0.8612 |
| 5bul-assembly1.cif.gz_A | 3 | 355 | 1 | 361 | 0.74 |
0.8066 |
| 7koe-assembly1.cif.gz_G | 1 | 358 | 2 | 399 | 0.739 |
0.8311 |
| 5tuf-assembly2.cif.gz_B | 4 | 355 | 1 | 354 | 0.7358 |
0.7862 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A7ZTP5-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9349 |
0.9567 |
| AF-Q8XBZ8-F1-model_v4 | 1 | 360 | 1 | 353 | 0.934 |
0.9559 |
| AF-Q3YWC2-F1-model_v4 | 1 | 360 | 1 | 353 | 0.934 |
0.9559 |
| AF-P31456-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9333 |
0.9553 |
| AF-Q329C3-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9299 |
0.9522 |
| AF-Q1R4P6-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9191 |
0.9558 |
| AF-Q8CVK0-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9189 |
0.9556 |
| AF-Q0TB17-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9185 |
0.9553 |
| AF-Q83IZ5-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9179 |
0.9548 |
| AF-Q0SYN3-F1-model_v4 | 1 | 360 | 1 | 353 | 0.9179 |
0.9548 |