Cluster: HRGMv2_2990_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2990
- CGC Family ID: CGCFAM_01435
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2990_13 | HRGMv2_2990_13_9 | 8680 | 9267 | + | 3.A.1.17.6 |
| CAZyme | HRGMv2_2990_13 | HRGMv2_2990_13_10 | 9331 | 10290 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_2990_13 | HRGMv2_2990_13_11 | 10284 | 11807 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2990_13 | HRGMv2_2990_13_12 | 12103 | 13881 | + | CE20 |
Gene ID: HRGMv2_2990_13_9
Type: TC
Location: 8680 - 9267 (+)
Type: TC
Location: 8680 - 9267 (+)
Gene ID: HRGMv2_2990_13_10
Type: CAZyme
Location: 9331 - 10290 (-)
Type: CAZyme
Location: 9331 - 10290 (-)
Gene ID: HRGMv2_2990_13_11
Type:
Location: 10284 - 11807 (-)
Type:
Location: 10284 - 11807 (-)
Gene ID: HRGMv2_2990_13_12
Type: CAZyme
Location: 12103 - 13881 (+)
Type: CAZyme
Location: 12103 - 13881 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UBA644
Genus
HGM12619
Species
HGM12619 sp900753195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.