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PROTEIN: HRGMv2_2990_13_11

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2990_13_11.pdb
Genome ID:
HRGMv2_2990
Protein ID:
HRGMv2_2990_13_11

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Detailed structural information will appear here after analysis...

Protein Sequence 
MPKRENVLQH   VAIYIVCGLM   LIFLAVLTSA   SFAGYWEMNT   GNSMLENVEY   RSNDPLIVFP 60
GLAVGIALCY   VVRRYLRQIP   VHCFTSVLFV   WITVLGCVWI   FSALSAPTED   SYRVMKAAFD 120
ASNGDLSSVT   IDYFRCFPFQ   LGYVLFSEGL   MRLFCPEMNF   LVLQVINVLC   LAVSYWAIIS 180
AMKYFASDDA   RRITAVLLGC   LFQPVLFCTF   LYGNIPAFAF   AMLAVLFHFK   FLYSFKPLHG 240
IATAMFIGIA   CALKLNCSII   LVAMIIHTVF   AGHGKMRTFF   LRLGYVFLAA   VMAVGIKGAA 300
VRVYEVRSGE   NFGSGIPMIC   WAAMGLNESY   IAPGWYDPAY   TVVNFSNNGG   DGEKTSAVAV 360
QAVKDRISDF   ISDPGYAGRF   FATKFTTQFN   EPTYQSIWTN   EVRGHYGEMN   FLGRYVCGAG 420
KDSVTGYMAA   LQRLVLTAAF   LAAAMCIKDK   NYGAMLLLLS   VLGGIAYHMI   FEAKSQYFET 480
YFILLAAVGG   YGLDRVFDLS   DRRKKEC 507
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A5K4F436-F1-model_v4 71 507 1 422 0.6025 0.6934
AF-Q9BPQ5-F1-model_v4 67 505 1 349 0.5624 0.7468
AF-Q4DCK0-F1-model_v4 70 501 5 346 0.5554 0.7519
AF-Q9CC27-F1-model_v4 80 499 28 357 0.5218 0.8004
AF-Q9FX21-F1-model_v4 76 507 37 487 0.4709 0.6504
AF-A0A1D6NBZ9-F1-model_v4 76 507 21 508 0.4626 0.6501
AF-Q9XZ53-F1-model_v4 76 507 15 483 0.4624 0.651
AF-I1J4K6-F1-model_v4 76 507 19 515 0.4612 0.6512
AF-G4LZ93-F1-model_v4 76 507 17 491 0.4612 0.6486
AF-I1MM02-F1-model_v4 76 507 19 515 0.4607 0.6498
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A6F9WZW7 GT39 1 503 1 379 0.6639 0.8151
WCO68223.1 GT39 80 504 1 393 0.6555 0.7882
AF-B0CDY1-F1-model_v4 GT39 2 505 2 426 0.6281 0.7244
AF-A0A0K1NAU4-F1-model_v4 GT39 3 501 1 436 0.623 0.7111
AF-A0A7R6VCG0-F1-model_v4 GT39 78 505 2 427 0.604 0.7053
UIE37590.1 GT39 77 505 11 476 0.6016 0.7232
AF-A0A1G8QLP8-F1-model_v4 GT39 1 505 49 490 0.6 0.7109
AF-A0A286EUZ8-F1-model_v4 GT39 3 505 45 486 0.5972 0.7046
UDF05385.1 GT0 76 505 29 469 0.575 0.6986
UDQ99019.1 GT2 2 506 149 730 0.5747 0.6879
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A6F9WZW7 GT39 1 503 1 379 0.6639 0.8151
A5GCG9 GT39 73 503 1 369 0.6624 0.8236
A0A7D6J3H2 GT39 81 504 1 379 0.6623 0.8096
WCO68223.1 GT39 80 504 1 393 0.6555 0.7882
QXE90561.1 GT39 79 502 3 364 0.6536 0.8219
A0A0K1NAU4 GT39 3 501 1 436 0.623 0.7111
UBH06733.1 GT39 77 507 7 458 0.6082 0.7202
Q2JNM3 GT39 76 505 34 457 0.6036 0.7366
A0A7R6VNI1 GT39 80 505 6 428 0.6036 0.7095
UIE37590.1 GT39 77 505 11 476 0.6016 0.7232
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
8agc-assembly1.cif.gz_A 76 507 7 434 0.4753 0.6479
6s7t-assembly1.cif.gz_A 76 505 6 427 0.4738 0.6579
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9BPQ5-F1-model_v4 67 505 1 349 0.5624 0.7468
AF-Q7XQ88-F1-model_v4 76 507 24 473 0.475 0.6519
AF-Q9FX21-F1-model_v4 76 507 37 487 0.4709 0.6504
AF-Q93ZY3-F1-model_v4 1 507 1 517 0.4628 0.5659
AF-Q6F2Z1-F1-model_v4 76 507 20 522 0.4586 0.6498
AF-E2RG47-F1-model_v4 76 507 68 532 0.4506 0.6503
Download Full SwissProt Results