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Cluster: HRGMv2_2980_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2980_12 HRGMv2_2980_12_21 26707 28779 - 3.A.3.6.5
pfam HRGMv2_2980_12 HRGMv2_2980_12_22 28810 29076 - Trns_repr_metal
TC HRGMv2_2980_12 HRGMv2_2980_12_23 29587 31077 + 3.A.1.121.3
pfam HRGMv2_2980_12 HRGMv2_2980_12_24 31260 32765 - DUF4127
CAZyme HRGMv2_2980_12 HRGMv2_2980_12_25 32804 34687 - GH20
pfam HRGMv2_2980_12 HRGMv2_2980_12_26 34774 36273 - DUF4127
NULL(UNKNOWN) HRGMv2_2980_12 HRGMv2_2980_12_27 36302 36985 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2980_12 HRGMv2_2980_12_28 37031 38230 - 3.A.1.1.10
TC HRGMv2_2980_12 HRGMv2_2980_12_29 38246 39214 - 3.A.1.1.10
Gene ID: HRGMv2_2980_12_21
Type: TC
Location: 26707 - 28779 (-)
Gene ID: HRGMv2_2980_12_22
Type: pfam
Location: 28810 - 29076 (-)
Gene ID: HRGMv2_2980_12_23
Type: TC
Location: 29587 - 31077 (+)
Gene ID: HRGMv2_2980_12_24
Type: pfam
Location: 31260 - 32765 (-)
Gene ID: HRGMv2_2980_12_25
Type: CAZyme
Location: 32804 - 34687 (-)
Gene ID: HRGMv2_2980_12_26
Type: pfam
Location: 34774 - 36273 (-)
Gene ID: HRGMv2_2980_12_27
Type:
Location: 36302 - 36985 (-)
Gene ID: HRGMv2_2980_12_28
Type: TC
Location: 37031 - 38230 (-)
Gene ID: HRGMv2_2980_12_29
Type: TC
Location: 38246 - 39214 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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