PROTEIN: HRGMv2_2980_12_27
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Protein File & Metadata
Source:
HRGMv2_2980_12_27.pdb
Genome ID:
Protein ID:
HRGMv2_2980_12_27
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Protein Sequence
MDYLSVLNQR RPALIVSLPG NRVELARAAV ECGADVIKVH MNVQHRASGL HFGTFEEEKN 60 TLEQIAAVSK GPCGIVAGNS VEDVERDYQK AFGLGYSFIS LYASAMPLSV LATPGLIKMV 120 ALACDYTLED VRGLPRIGAD VLEASIMRPE TYGQRLTAAE LLQYSALCKE SELPVVIPTQ 180 RAIRPTEVGQ LAGCGVAGIM VGAVVTGAKE ESLRRSVSAF RNELDKL 227
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1D6L7U4-F1-model_v4 | 1 | 227 | 11 | 274 | 0.7694 |
0.8643 |
| AF-Q59649-F1-model_v4 | 9 | 227 | 1 | 207 | 0.768 |
0.8366 |
| AF-Q7Y1H9-F1-model_v4 | 1 | 227 | 16 | 279 | 0.7631 |
0.8637 |
| AF-Q2FYR3-F1-model_v4 | 10 | 226 | 1 | 242 | 0.7468 |
0.833 |
| AF-P66921-F1-model_v4 | 4 | 227 | 1 | 210 | 0.7431 |
0.7958 |
| AF-Q9HX40-F1-model_v4 | 5 | 227 | 1 | 209 | 0.7402 |
0.7968 |
| AF-P71350-F1-model_v4 | 1 | 227 | 1 | 224 | 0.7357 |
0.7687 |
| AF-I1N9L7-F1-model_v4 | 1 | 227 | 48 | 311 | 0.7303 |
0.8631 |
| AF-I1JNY7-F1-model_v4 | 1 | 227 | 46 | 311 | 0.729 |
0.8617 |
| AF-Q8DND5-F1-model_v4 | 9 | 227 | 1 | 218 | 0.7286 |
0.7753 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1rd5-assembly1.cif.gz_A | 1 | 225 | 2 | 261 | 0.7817 |
0.8663 |
| 1tjr-assembly1.cif.gz_A | 1 | 225 | 2 | 261 | 0.7803 |
0.8666 |
| 1xi3-assembly1.cif.gz_B | 2 | 227 | 1 | 200 | 0.7773 |
0.8519 |
| 5ocw-assembly1.cif.gz_A | 1 | 227 | 3 | 257 | 0.7642 |
0.8387 |
| 1geq-assembly2.cif.gz_B | 4 | 223 | 1 | 245 | 0.7592 |
0.8374 |
| 6dwe-assembly1.cif.gz_A | 1 | 227 | 3 | 249 | 0.7502 |
0.8121 |
| 1kv8-assembly1.cif.gz_B | 10 | 227 | 1 | 215 | 0.7429 |
0.7942 |
| 1g67-assembly1.cif.gz_A | 1 | 227 | 1 | 221 | 0.7375 |
0.7794 |
| 1g4t-assembly1.cif.gz_A | 1 | 227 | 1 | 222 | 0.737 |
0.7774 |
| 5umf-assembly1.cif.gz_C | 11 | 227 | 1 | 224 | 0.7253 |
0.7831 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0W628-F1-model_v4 | 11 | 227 | 1 | 212 | 0.786 |
0.8404 |
| AF-B7JUK2-F1-model_v4 | 1 | 227 | 2 | 266 | 0.7846 |
0.872 |
| AF-O67502-F1-model_v4 | 1 | 227 | 2 | 262 | 0.7792 |
0.8602 |
| AF-B0JXU3-F1-model_v4 | 1 | 225 | 2 | 264 | 0.7771 |
0.8671 |
| AF-B3EKM6-F1-model_v4 | 11 | 227 | 1 | 214 | 0.7769 |
0.8304 |
| AF-Q10W95-F1-model_v4 | 1 | 225 | 2 | 265 | 0.7763 |
0.8675 |
| AF-O28673-F1-model_v4 | 4 | 226 | 1 | 248 | 0.776 |
0.8487 |
| AF-P77960-F1-model_v4 | 1 | 225 | 2 | 264 | 0.7736 |
0.8629 |
| AF-A8M9N4-F1-model_v4 | 2 | 227 | 1 | 205 | 0.7706 |
0.831 |
| AF-Q46LX8-F1-model_v4 | 1 | 227 | 4 | 268 | 0.7695 |
0.8618 |