Cluster: HRGMv2_2980_CGC2
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 14
- Substrate:
- Genome ID: HRGMv2_2980
- CGC Family ID: CGCFAM_00073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_11 | 10867 | 11988 | + | GT4 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_12 | 12030 | 13007 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2980_1 | HRGMv2_2980_1_13 | 13030 | 14265 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2980_1 | HRGMv2_2980_1_14 | 14302 | 15780 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_15 | 15978 | 17237 | + | GT4 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_16 | 17264 | 18220 | + | GT2 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_17 | 18213 | 19217 | + | GT2 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_18 | 19230 | 20243 | + | GT2 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_19 | 20240 | 22465 | + | GT2 | GT4 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_20 | 22471 | 23526 | + | GT2 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_21 | 23563 | 24630 | + | GT2 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_22 | 24644 | 25726 | + | GT2 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_23 | 25733 | 26830 | + | GT2 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_24 | 26832 | 27887 | + | GT2 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_25 | 27915 | 29009 | + | GT2 |
| TC | HRGMv2_2980_1 | HRGMv2_2980_1_26 | 29136 | 30008 | + | 3.A.1.103.5 |
| TC | HRGMv2_2980_1 | HRGMv2_2980_1_27 | 30028 | 31320 | + | 3.A.1.103.5 |
| CAZyme | HRGMv2_2980_1 | HRGMv2_2980_1_28 | 31323 | 32315 | + | GT100 |
Gene ID: HRGMv2_2980_1_11
Type: CAZyme
Location: 10867 - 11988 (+)
Type: CAZyme
Location: 10867 - 11988 (+)
Gene ID: HRGMv2_2980_1_12
Type: CAZyme
Location: 12030 - 13007 (+)
Type: CAZyme
Location: 12030 - 13007 (+)
Gene ID: HRGMv2_2980_1_13
Type:
Location: 13030 - 14265 (+)
Type:
Location: 13030 - 14265 (+)
Gene ID: HRGMv2_2980_1_14
Type:
Location: 14302 - 15780 (+)
Type:
Location: 14302 - 15780 (+)
Gene ID: HRGMv2_2980_1_15
Type: CAZyme
Location: 15978 - 17237 (+)
Type: CAZyme
Location: 15978 - 17237 (+)
Gene ID: HRGMv2_2980_1_16
Type: CAZyme
Location: 17264 - 18220 (+)
Type: CAZyme
Location: 17264 - 18220 (+)
Gene ID: HRGMv2_2980_1_17
Type: CAZyme
Location: 18213 - 19217 (+)
Type: CAZyme
Location: 18213 - 19217 (+)
Gene ID: HRGMv2_2980_1_18
Type: CAZyme
Location: 19230 - 20243 (+)
Type: CAZyme
Location: 19230 - 20243 (+)
Gene ID: HRGMv2_2980_1_19
Type: CAZyme
Location: 20240 - 22465 (+)
Type: CAZyme
Location: 20240 - 22465 (+)
Gene ID: HRGMv2_2980_1_20
Type: CAZyme
Location: 22471 - 23526 (+)
Type: CAZyme
Location: 22471 - 23526 (+)
Gene ID: HRGMv2_2980_1_21
Type: CAZyme
Location: 23563 - 24630 (+)
Type: CAZyme
Location: 23563 - 24630 (+)
Gene ID: HRGMv2_2980_1_22
Type: CAZyme
Location: 24644 - 25726 (+)
Type: CAZyme
Location: 24644 - 25726 (+)
Gene ID: HRGMv2_2980_1_23
Type: CAZyme
Location: 25733 - 26830 (+)
Type: CAZyme
Location: 25733 - 26830 (+)
Gene ID: HRGMv2_2980_1_24
Type: CAZyme
Location: 26832 - 27887 (+)
Type: CAZyme
Location: 26832 - 27887 (+)
Gene ID: HRGMv2_2980_1_25
Type: CAZyme
Location: 27915 - 29009 (+)
Type: CAZyme
Location: 27915 - 29009 (+)
Gene ID: HRGMv2_2980_1_26
Type: TC
Location: 29136 - 30008 (+)
Type: TC
Location: 29136 - 30008 (+)
Gene ID: HRGMv2_2980_1_27
Type: TC
Location: 30028 - 31320 (+)
Type: TC
Location: 30028 - 31320 (+)
Gene ID: HRGMv2_2980_1_28
Type: CAZyme
Location: 31323 - 32315 (+)
Type: CAZyme
Location: 31323 - 32315 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella sp900543285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.