PROTEIN: HRGMv2_2980_1_13
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2980_1_13.pdb
Genome ID:
Protein ID:
HRGMv2_2980_1_13
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKLLLILDSV EYPLAPNPVL ARRVAACLAQ RGHAVDLLEL WDGETPPPSA PGCRQFPLAF 60 ADEREMNRAL EFGQSGSTPV PLRLARLCRR PSAALAAVRQ LALKRPRRVT AARREIERLD 120 RLYHYDAAVA VAAPYAGSFA LAGAAFGGRK ASWQMDPYAA NRSYAAPGAW EKELELGRSM 180 DHIFTAPTAA GDFAPGAPLA ALAAKMQVVD FPGLVPPTAQ SKPVPGAPLR CVFAGSLYPQ 240 LRTPHFALEL FAALDLTDVQ LSFLGGGWQN YPACLLPPYY DILGDRLTVA GPVPPSQAAA 300 ALAGADVLLS LGNGVDNQVP SKLFDYLASG KPILHLAKLQ SDPCLAYLEK WPLACIVQES 360 EGVTPQVLAR VCAFLREKGR LRLPFAEAAR LYPENTPEHA VSLFERAFAA P 411
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F3N9-F1-model_v4 | 1 | 411 | 1 | 365 | 0.7616 |
0.8343 |
| AF-Q8CWU0-F1-model_v4 | 1 | 410 | 3 | 385 | 0.7607 |
0.8122 |
| AF-Q5FAD9-F1-model_v4 | 2 | 410 | 1 | 354 | 0.7599 |
0.8362 |
| AF-O05083-F1-model_v4 | 1 | 408 | 1 | 353 | 0.7594 |
0.8375 |
| AF-G3XD85-F1-model_v4 | 1 | 411 | 1 | 370 | 0.7592 |
0.8213 |
| AF-Q5F734-F1-model_v4 | 1 | 408 | 4 | 354 | 0.7591 |
0.8404 |
| AF-Q2G1J7-F1-model_v4 | 1 | 409 | 4 | 401 | 0.7556 |
0.7912 |
| AF-F4IBV4-F1-model_v4 | 1 | 411 | 9 | 400 | 0.7548 |
0.8025 |
| AF-O07147-F1-model_v4 | 1 | 411 | 1 | 365 | 0.7547 |
0.8274 |
| AF-Q9HZ80-F1-model_v4 | 1 | 411 | 1 | 411 | 0.7535 |
0.7754 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1W1Z2J3 | GT0 | 1 | 411 | 2 | 388 | 0.8231 |
0.8621 |
| A0A0W0VWK4 | GT4 | 1 | 409 | 1 | 431 | 0.8168 |
0.8549 |
| UVR78230.1 | GT0 | 1 | 410 | 1 | 412 | 0.8158 |
0.834 |
| A0A517ZPG7 | GT4 | 1 | 411 | 1 | 435 | 0.8135 |
0.8615 |
| AF-A0A517ZPG7-F1-model_v4 | GT4 | 1 | 411 | 1 | 435 | 0.8135 |
0.8615 |
| A0A139KCQ5 | GT0 | 1 | 410 | 1 | 413 | 0.8122 |
0.8322 |
| A0A943T7V0 | GT0 | 1 | 411 | 1 | 410 | 0.8107 |
0.8308 |
| AF-M1VK77-F1-model_v4 | GT4 | 1 | 409 | 7 | 424 | 0.8085 |
0.8422 |
| AF-T1SF07-F1-model_v4 | GT4 | 1 | 409 | 7 | 424 | 0.8072 |
0.8404 |
| AF-A0A1P8VR31-F1-model_v4 | GT4 | 1 | 409 | 7 | 424 | 0.8067 |
0.8402 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0W0VWK4 | GT4 | 1 | 409 | 1 | 431 | 0.8168 |
0.8549 |
| A0A517ZPG7 | GT4 | 1 | 411 | 1 | 435 | 0.8135 |
0.8615 |
| T1SF07 | GT4 | 1 | 409 | 7 | 424 | 0.8072 |
0.8404 |
| A0A127VKF0 | GT4 | 1 | 411 | 10 | 437 | 0.7999 |
0.8398 |
| A6T0A6 | GT4 | 1 | 411 | 1 | 435 | 0.7991 |
0.8373 |
| F6AVN9 | GT4 | 1 | 411 | 1 | 419 | 0.798 |
0.8239 |
| A0A0E3UVM0 | GT4 | 1 | 411 | 1 | 390 | 0.7977 |
0.836 |
| A0A7S9RGP3 | GT4 | 1 | 410 | 2 | 392 | 0.7974 |
0.8351 |
| A0A4D6GU89 | GT4 | 1 | 411 | 10 | 388 | 0.7969 |
0.8546 |
| A0A0E3UNS9 | GT4 | 1 | 411 | 1 | 424 | 0.794 |
0.8303 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly4.cif.gz_G | 1 | 411 | 2 | 363 | 0.7695 |
0.838 |
| 3mbo-assembly1.cif.gz_A | 1 | 411 | 2 | 371 | 0.7632 |
0.8246 |
| 3mbo-assembly2.cif.gz_C | 1 | 411 | 1 | 371 | 0.7594 |
0.8203 |
| 7qsg-assembly1.cif.gz_A | 1 | 411 | 4 | 379 | 0.7592 |
0.8177 |
| 6n1x-assembly1.cif.gz_A | 1 | 411 | 4 | 376 | 0.7576 |
0.8186 |
| 5d00-assembly1.cif.gz_A | 1 | 411 | 2 | 361 | 0.7508 |
0.8204 |
| 6ejj-assembly1.cif.gz_A | 1 | 411 | 2 | 359 | 0.7414 |
0.8159 |
| 2gek-assembly1.cif.gz_A | 1 | 411 | 1 | 353 | 0.7354 |
0.8191 |
| 3c4q-assembly2.cif.gz_B | 1 | 411 | 1 | 391 | 0.7312 |
0.7749 |
| 7mi0-assembly1.cif.gz_A | 1 | 411 | 3 | 379 | 0.7286 |
0.7846 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4GU66-F1-model_v4 | 7 | 411 | 1 | 372 | 0.768 |
0.8242 |
| AF-O05083-F1-model_v4 | 1 | 408 | 1 | 353 | 0.7594 |
0.8375 |
| AF-Q46634-F1-model_v4 | 1 | 409 | 1 | 351 | 0.7524 |
0.8308 |
| AF-Q8KIU8-F1-model_v4 | 1 | 411 | 2 | 398 | 0.7501 |
0.7885 |
| AF-Q93P60-F1-model_v4 | 1 | 411 | 1 | 392 | 0.7483 |
0.7902 |
| AF-Q59002-F1-model_v4 | 1 | 411 | 1 | 386 | 0.7444 |
0.792 |
| AF-Q58469-F1-model_v4 | 1 | 411 | 4 | 392 | 0.7414 |
0.7862 |
| AF-B2SUK8-F1-model_v4 | 1 | 411 | 1 | 372 | 0.7414 |
0.8059 |
| AF-Q58577-F1-model_v4 | 1 | 411 | 3 | 351 | 0.7394 |
0.8223 |
| AF-P9WMZ2-F1-model_v4 | 1 | 411 | 2 | 383 | 0.7389 |
0.79 |