Cluster: HRGMv2_2979_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2979
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2979_3 | HRGMv2_2979_3_133 | 145231 | 146418 | + | 2.A.36.2.1 |
| NULL(UNKNOWN) | HRGMv2_2979_3 | HRGMv2_2979_3_134 | 146432 | 147058 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2979_3 | HRGMv2_2979_3_135 | 147277 | 147627 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2979_3 | HRGMv2_2979_3_136 | 148074 | 149408 | + | GH8 |
Gene ID: HRGMv2_2979_3_133
Type: TC
Location: 145231 - 146418 (+)
Type: TC
Location: 145231 - 146418 (+)
Gene ID: HRGMv2_2979_3_134
Type:
Location: 146432 - 147058 (-)
Type:
Location: 146432 - 147058 (-)
Gene ID: HRGMv2_2979_3_135
Type:
Location: 147277 - 147627 (+)
Type:
Location: 147277 - 147627 (+)
Gene ID: HRGMv2_2979_3_136
Type: CAZyme
Location: 148074 - 149408 (+)
Type: CAZyme
Location: 148074 - 149408 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp934474025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.