Cluster: HRGMv2_2979_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2979
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2979_22 | HRGMv2_2979_22_25 | 23319 | 24524 | - | 2.A.37.2.2 |
| pfam | HRGMv2_2979_22 | HRGMv2_2979_22_26 | 24717 | 25691 | + | Phage_integrase | Phage_int_SAM_1 |
| STP | HRGMv2_2979_22 | HRGMv2_2979_22_27 | 25708 | 26223 | + | Nitroreductase | Nitroreductase |
| CAZyme | HRGMv2_2979_22 | HRGMv2_2979_22_28 | 26225 | 26821 | + | GH73 |
Gene ID: HRGMv2_2979_22_25
Type: TC
Location: 23319 - 24524 (-)
Type: TC
Location: 23319 - 24524 (-)
Gene ID: HRGMv2_2979_22_26
Type: pfam
Location: 24717 - 25691 (+)
Type: pfam
Location: 24717 - 25691 (+)
Gene ID: HRGMv2_2979_22_27
Type: STP
Location: 25708 - 26223 (+)
Type: STP
Location: 25708 - 26223 (+)
Gene ID: HRGMv2_2979_22_28
Type: CAZyme
Location: 26225 - 26821 (+)
Type: CAZyme
Location: 26225 - 26821 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp934474025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.