Cluster: HRGMv2_2979_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2979
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2979_15 | HRGMv2_2979_15_31 | 36940 | 38496 | + | 3.D.1.8.1 |
| STP | HRGMv2_2979_15 | HRGMv2_2979_15_32 | 38625 | 39956 | + | EPSP_synthase |
| peptidase | HRGMv2_2979_15 | HRGMv2_2979_15_33 | 39963 | 40592 | + | S33.UPW |
| CAZyme | HRGMv2_2979_15 | HRGMv2_2979_15_34 | 40968 | 43376 | + | GT35 |
| CAZyme | HRGMv2_2979_15 | HRGMv2_2979_15_35 | 43458 | 45341 | + | GH13_39 |
Gene ID: HRGMv2_2979_15_31
Type: TC
Location: 36940 - 38496 (+)
Type: TC
Location: 36940 - 38496 (+)
Gene ID: HRGMv2_2979_15_32
Type: STP
Location: 38625 - 39956 (+)
Type: STP
Location: 38625 - 39956 (+)
Gene ID: HRGMv2_2979_15_33
Type: peptidase
Location: 39963 - 40592 (+)
Type: peptidase
Location: 39963 - 40592 (+)
Gene ID: HRGMv2_2979_15_34
Type: CAZyme
Location: 40968 - 43376 (+)
Type: CAZyme
Location: 40968 - 43376 (+)
Gene ID: HRGMv2_2979_15_35
Type: CAZyme
Location: 43458 - 45341 (+)
Type: CAZyme
Location: 43458 - 45341 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp934474025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.