Cluster: HRGMv2_2979_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2979
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2979_10 | HRGMv2_2979_10_19 | 23879 | 24313 | + | 9.A.11.1.1 |
| pfam | HRGMv2_2979_10 | HRGMv2_2979_10_20 | 24861 | 25340 | + | ACPS |
| pfam | HRGMv2_2979_10 | HRGMv2_2979_10_21 | 25342 | 26571 | + | SH3_4 | SH3_3 | SH3_3 |
| CAZyme | HRGMv2_2979_10 | HRGMv2_2979_10_22 | 26607 | 28988 | + | GH94 |
Gene ID: HRGMv2_2979_10_19
Type: TC
Location: 23879 - 24313 (+)
Type: TC
Location: 23879 - 24313 (+)
Gene ID: HRGMv2_2979_10_20
Type: pfam
Location: 24861 - 25340 (+)
Type: pfam
Location: 24861 - 25340 (+)
Gene ID: HRGMv2_2979_10_21
Type: pfam
Location: 25342 - 26571 (+)
Type: pfam
Location: 25342 - 26571 (+)
Gene ID: HRGMv2_2979_10_22
Type: CAZyme
Location: 26607 - 28988 (+)
Type: CAZyme
Location: 26607 - 28988 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp934474025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.