Cluster: HRGMv2_2979_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2979
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2979_4 | HRGMv2_2979_4_49 | 52231 | 53685 | + | 8.A.3.2.1 |
| pfam | HRGMv2_2979_4 | HRGMv2_2979_4_50 | 53682 | 54353 | + | CpsB_CapC |
| CAZyme | HRGMv2_2979_4 | HRGMv2_2979_4_51 | 54393 | 55664 | - | GH25 |
| TC | HRGMv2_2979_4 | HRGMv2_2979_4_52 | 55784 | 57868 | - | 3.A.3.6.10 |
Gene ID: HRGMv2_2979_4_49
Type: TC
Location: 52231 - 53685 (+)
Type: TC
Location: 52231 - 53685 (+)
Gene ID: HRGMv2_2979_4_50
Type: pfam
Location: 53682 - 54353 (+)
Type: pfam
Location: 53682 - 54353 (+)
Gene ID: HRGMv2_2979_4_51
Type: CAZyme
Location: 54393 - 55664 (-)
Type: CAZyme
Location: 54393 - 55664 (-)
Gene ID: HRGMv2_2979_4_52
Type: TC
Location: 55784 - 57868 (-)
Type: TC
Location: 55784 - 57868 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp934474025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.