Cluster: HRGMv2_2978_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2978
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2978_36 | HRGMv2_2978_36_1 | 100 | 2346 | + | GH3 |
| pfam | HRGMv2_2978_36 | HRGMv2_2978_36_2 | 2826 | 3596 | + | CbiQ |
| TC | HRGMv2_2978_36 | HRGMv2_2978_36_3 | 3607 | 4434 | + | 3.A.1.23.2 |
| TC | HRGMv2_2978_36 | HRGMv2_2978_36_4 | 4493 | 5557 | + | 3.A.1.23.8 |
| CAZyme | HRGMv2_2978_36 | HRGMv2_2978_36_5 | 5805 | 8789 | + | CBM13 | PL11 |
Gene ID: HRGMv2_2978_36_1
Type: CAZyme
Location: 100 - 2346 (+)
Type: CAZyme
Location: 100 - 2346 (+)
Gene ID: HRGMv2_2978_36_2
Type: pfam
Location: 2826 - 3596 (+)
Type: pfam
Location: 2826 - 3596 (+)
Gene ID: HRGMv2_2978_36_3
Type: TC
Location: 3607 - 4434 (+)
Type: TC
Location: 3607 - 4434 (+)
Gene ID: HRGMv2_2978_36_4
Type: TC
Location: 4493 - 5557 (+)
Type: TC
Location: 4493 - 5557 (+)
Gene ID: HRGMv2_2978_36_5
Type: CAZyme
Location: 5805 - 8789 (+)
Type: CAZyme
Location: 5805 - 8789 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp900551505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.