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Cluster: HRGMv2_2978_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2978_6 HRGMv2_2978_6_7 8265 10214 + 3.A.16.1.3
pfam HRGMv2_2978_6 HRGMv2_2978_6_8 10356 10793 - ABC_trans_CmpB
CAZyme HRGMv2_2978_6 HRGMv2_2978_6_9 10860 12335 + GH77
CAZyme HRGMv2_2978_6 HRGMv2_2978_6_10 12348 14696 + GT35
pfam HRGMv2_2978_6 HRGMv2_2978_6_11 14776 15921 - TelA
pfam HRGMv2_2978_6 HRGMv2_2978_6_12 15924 18212 - YceG_bac | YceG_bac | YceG_bac
TC HRGMv2_2978_6 HRGMv2_2978_6_13 18367 19020 - 3.A.1.122.2
TC HRGMv2_2978_6 HRGMv2_2978_6_14 19139 20272 + 2.A.86.1.11
Gene ID: HRGMv2_2978_6_7
Type: TC
Location: 8265 - 10214 (+)
Gene ID: HRGMv2_2978_6_8
Type: pfam
Location: 10356 - 10793 (-)
Gene ID: HRGMv2_2978_6_9
Type: CAZyme
Location: 10860 - 12335 (+)
Gene ID: HRGMv2_2978_6_10
Type: CAZyme
Location: 12348 - 14696 (+)
Gene ID: HRGMv2_2978_6_11
Type: pfam
Location: 14776 - 15921 (-)
Gene ID: HRGMv2_2978_6_12
Type: pfam
Location: 15924 - 18212 (-)
Gene ID: HRGMv2_2978_6_13
Type: TC
Location: 18367 - 19020 (-)
Gene ID: HRGMv2_2978_6_14
Type: TC
Location: 19139 - 20272 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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