Cluster: HRGMv2_2976_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2976
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2976_30 | HRGMv2_2976_30_5 | 5387 | 7318 | - | GT39 |
| pfam | HRGMv2_2976_30 | HRGMv2_2976_30_6 | 7440 | 8399 | - | PseudoU_synth_2 | S4 |
| TC | HRGMv2_2976_30 | HRGMv2_2976_30_7 | 8426 | 9769 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_2976_30_5
Type: CAZyme
Location: 5387 - 7318 (-)
Type: CAZyme
Location: 5387 - 7318 (-)
Gene ID: HRGMv2_2976_30_6
Type: pfam
Location: 7440 - 8399 (-)
Type: pfam
Location: 7440 - 8399 (-)
Gene ID: HRGMv2_2976_30_7
Type: TC
Location: 8426 - 9769 (-)
Type: TC
Location: 8426 - 9769 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2976_30_6 | vegetarian > vegan | 1.36056 | 0.00241 |