Cluster: HRGMv2_2976_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2976
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2976_27 | HRGMv2_2976_27_21 | 27791 | 29260 | - | GH43_35 |
| pfam | HRGMv2_2976_27 | HRGMv2_2976_27_22 | 29257 | 30087 | - | MatE |
| pfam | HRGMv2_2976_27 | HRGMv2_2976_27_23 | 30118 | 30564 | - | DDE_3 |
| TC | HRGMv2_2976_27 | HRGMv2_2976_27_24 | 31005 | 32381 | - | 2.A.66.1.47 |
| CAZyme | HRGMv2_2976_27 | HRGMv2_2976_27_25 | 32423 | 34144 | - | GH3 |
Gene ID: HRGMv2_2976_27_21
Type: CAZyme
Location: 27791 - 29260 (-)
Type: CAZyme
Location: 27791 - 29260 (-)
Gene ID: HRGMv2_2976_27_22
Type: pfam
Location: 29257 - 30087 (-)
Type: pfam
Location: 29257 - 30087 (-)
Gene ID: HRGMv2_2976_27_23
Type: pfam
Location: 30118 - 30564 (-)
Type: pfam
Location: 30118 - 30564 (-)
Gene ID: HRGMv2_2976_27_24
Type: TC
Location: 31005 - 32381 (-)
Type: TC
Location: 31005 - 32381 (-)
Gene ID: HRGMv2_2976_27_25
Type: CAZyme
Location: 32423 - 34144 (-)
Type: CAZyme
Location: 32423 - 34144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.