Cluster: HRGMv2_2976_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2976
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2976_10 | HRGMv2_2976_10_11 | 13119 | 14243 | - | GT28 |
| TC | HRGMv2_2976_10 | HRGMv2_2976_10_12 | 14314 | 15444 | - | 2.A.103.1.3 |
| TC | HRGMv2_2976_10 | HRGMv2_2976_10_13 | 15462 | 16439 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_2976_10_11
Type: CAZyme
Location: 13119 - 14243 (-)
Type: CAZyme
Location: 13119 - 14243 (-)
Gene ID: HRGMv2_2976_10_12
Type: TC
Location: 14314 - 15444 (-)
Type: TC
Location: 14314 - 15444 (-)
Gene ID: HRGMv2_2976_10_13
Type: TC
Location: 15462 - 16439 (-)
Type: TC
Location: 15462 - 16439 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2976_10_11 | vegetarian > vegan | 2.97725 | 0.00241 |
| HRGMv2_2976_10_12 | vegetarian > vegan | 1.39029 | 0.00241 |
| HRGMv2_2976_10_13 | vegetarian > vegan | 1.11390 | 0.00241 |