Cluster: HRGMv2_2970_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2970
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2970_34 | HRGMv2_2970_34_3 | 1659 | 2360 | + | 3.A.1.122.7 |
| pfam | HRGMv2_2970_34 | HRGMv2_2970_34_4 | 2371 | 5949 | + | FtsX | FtsX |
| CAZyme | HRGMv2_2970_34 | HRGMv2_2970_34_5 | 6289 | 8325 | - | CE1 |
| TC | HRGMv2_2970_34 | HRGMv2_2970_34_6 | 8506 | 9393 | + | 8.A.5.1.4 |
Gene ID: HRGMv2_2970_34_3
Type: TC
Location: 1659 - 2360 (+)
Type: TC
Location: 1659 - 2360 (+)
Gene ID: HRGMv2_2970_34_4
Type: pfam
Location: 2371 - 5949 (+)
Type: pfam
Location: 2371 - 5949 (+)
Gene ID: HRGMv2_2970_34_5
Type: CAZyme
Location: 6289 - 8325 (-)
Type: CAZyme
Location: 6289 - 8325 (-)
Gene ID: HRGMv2_2970_34_6
Type: TC
Location: 8506 - 9393 (+)
Type: TC
Location: 8506 - 9393 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.