Cluster: HRGMv2_2970_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2970
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2970_27 | HRGMv2_2970_27_8 | 10830 | 11438 | - | 9.B.18.1.1 |
| TC | HRGMv2_2970_27 | HRGMv2_2970_27_9 | 11496 | 13382 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_2970_27 | HRGMv2_2970_27_10 | 13745 | 16060 | + | GH95 |
| CAZyme | HRGMv2_2970_27 | HRGMv2_2970_27_11 | 16113 | 17774 | + | CBM35 | GH26 |
Gene ID: HRGMv2_2970_27_8
Type: TC
Location: 10830 - 11438 (-)
Type: TC
Location: 10830 - 11438 (-)
Gene ID: HRGMv2_2970_27_9
Type: TC
Location: 11496 - 13382 (-)
Type: TC
Location: 11496 - 13382 (-)
Gene ID: HRGMv2_2970_27_10
Type: CAZyme
Location: 13745 - 16060 (+)
Type: CAZyme
Location: 13745 - 16060 (+)
Gene ID: HRGMv2_2970_27_11
Type: CAZyme
Location: 16113 - 17774 (+)
Type: CAZyme
Location: 16113 - 17774 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.