Cluster: HRGMv2_2970_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2970
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2970_128 | HRGMv2_2970_128_1 | 2 | 2014 | - | GH36 |
| CAZyme | HRGMv2_2970_128 | HRGMv2_2970_128_2 | 2112 | 3521 | - | GH13_18 |
| TC | HRGMv2_2970_128 | HRGMv2_2970_128_3 | 3530 | 4378 | - | 3.A.1.1.28 |
| TC | HRGMv2_2970_128 | HRGMv2_2970_128_4 | 4375 | 5256 | - | 3.A.1.1.28 |
| TC | HRGMv2_2970_128 | HRGMv2_2970_128_5 | 5257 | 6552 | - | 3.A.1.1.28 |
Gene ID: HRGMv2_2970_128_1
Type: CAZyme
Location: 2 - 2014 (-)
Type: CAZyme
Location: 2 - 2014 (-)
Gene ID: HRGMv2_2970_128_2
Type: CAZyme
Location: 2112 - 3521 (-)
Type: CAZyme
Location: 2112 - 3521 (-)
Gene ID: HRGMv2_2970_128_3
Type: TC
Location: 3530 - 4378 (-)
Type: TC
Location: 3530 - 4378 (-)
Gene ID: HRGMv2_2970_128_4
Type: TC
Location: 4375 - 5256 (-)
Type: TC
Location: 4375 - 5256 (-)
Gene ID: HRGMv2_2970_128_5
Type: TC
Location: 5257 - 6552 (-)
Type: TC
Location: 5257 - 6552 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.