Cluster: HRGMv2_2970_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2970
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2970_84 | HRGMv2_2970_84_3 | 2366 | 4771 | + | GT35 |
| STP | HRGMv2_2970_84 | HRGMv2_2970_84_4 | 4870 | 5523 | + | TPR_1 | TPR_1 |
| CAZyme | HRGMv2_2970_84 | HRGMv2_2970_84_5 | 5520 | 7442 | + | GH13_39 |
| STP | HRGMv2_2970_84 | HRGMv2_2970_84_6 | 7583 | 8995 | - | Citrate_synt |
| NULL(UNKNOWN) | HRGMv2_2970_84 | HRGMv2_2970_84_7 | 9280 | 9459 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2970_84 | HRGMv2_2970_84_8 | 9456 | 10184 | - | 9.B.100.1.1 |
Gene ID: HRGMv2_2970_84_3
Type: CAZyme
Location: 2366 - 4771 (+)
Type: CAZyme
Location: 2366 - 4771 (+)
Gene ID: HRGMv2_2970_84_4
Type: STP
Location: 4870 - 5523 (+)
Type: STP
Location: 4870 - 5523 (+)
Gene ID: HRGMv2_2970_84_5
Type: CAZyme
Location: 5520 - 7442 (+)
Type: CAZyme
Location: 5520 - 7442 (+)
Gene ID: HRGMv2_2970_84_6
Type: STP
Location: 7583 - 8995 (-)
Type: STP
Location: 7583 - 8995 (-)
Gene ID: HRGMv2_2970_84_7
Type:
Location: 9280 - 9459 (-)
Type:
Location: 9280 - 9459 (-)
Gene ID: HRGMv2_2970_84_8
Type: TC
Location: 9456 - 10184 (-)
Type: TC
Location: 9456 - 10184 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.