Cluster: HRGMv2_2970_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2970
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2970_53 | HRGMv2_2970_53_8 | 6978 | 8537 | + | 8.A.3.1.2 |
| pfam | HRGMv2_2970_53 | HRGMv2_2970_53_9 | 8551 | 9258 | + | CpsB_CapC |
| TC | HRGMv2_2970_53 | HRGMv2_2970_53_10 | 9322 | 10029 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_2970_53 | HRGMv2_2970_53_11 | 10281 | 12053 | + | CBM35 | GH26 |
Gene ID: HRGMv2_2970_53_8
Type: TC
Location: 6978 - 8537 (+)
Type: TC
Location: 6978 - 8537 (+)
Gene ID: HRGMv2_2970_53_9
Type: pfam
Location: 8551 - 9258 (+)
Type: pfam
Location: 8551 - 9258 (+)
Gene ID: HRGMv2_2970_53_10
Type: TC
Location: 9322 - 10029 (+)
Type: TC
Location: 9322 - 10029 (+)
Gene ID: HRGMv2_2970_53_11
Type: CAZyme
Location: 10281 - 12053 (+)
Type: CAZyme
Location: 10281 - 12053 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.