Cluster: HRGMv2_2966_CGC9
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2966
- CGC Family ID: CGCFAM_10263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2966_8 | HRGMv2_2966_8_35 | 49041 | 50948 | + | GH20 |
| pfam | HRGMv2_2966_8 | HRGMv2_2966_8_36 | 51108 | 51911 | - | Lipase_GDSL | Lipase_GDSL_2 |
| TC | HRGMv2_2966_8 | HRGMv2_2966_8_37 | 52004 | 52768 | - | 2.A.102.4.8 |
| STP | HRGMv2_2966_8 | HRGMv2_2966_8_38 | 53389 | 54939 | + | HD |
| NULL(UNKNOWN) | HRGMv2_2966_8 | HRGMv2_2966_8_39 | 55719 | 56312 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2966_8 | HRGMv2_2966_8_40 | 56536 | 57807 | + | GT2 |
| CAZyme | HRGMv2_2966_8 | HRGMv2_2966_8_41 | 57982 | 60489 | + | CE7 |
| pfam | HRGMv2_2966_8 | HRGMv2_2966_8_42 | 60550 | 61245 | - | DUF6198 |
| NULL(UNKNOWN) | HRGMv2_2966_8 | HRGMv2_2966_8_43 | 61579 | 62955 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2966_8 | HRGMv2_2966_8_44 | 62969 | 64417 | - | 2.A.50.2.1 |
Gene ID: HRGMv2_2966_8_35
Type: CAZyme
Location: 49041 - 50948 (+)
Type: CAZyme
Location: 49041 - 50948 (+)
Gene ID: HRGMv2_2966_8_36
Type: pfam
Location: 51108 - 51911 (-)
Type: pfam
Location: 51108 - 51911 (-)
Gene ID: HRGMv2_2966_8_37
Type: TC
Location: 52004 - 52768 (-)
Type: TC
Location: 52004 - 52768 (-)
Gene ID: HRGMv2_2966_8_38
Type: STP
Location: 53389 - 54939 (+)
Type: STP
Location: 53389 - 54939 (+)
Gene ID: HRGMv2_2966_8_39
Type:
Location: 55719 - 56312 (+)
Type:
Location: 55719 - 56312 (+)
Gene ID: HRGMv2_2966_8_40
Type: CAZyme
Location: 56536 - 57807 (+)
Type: CAZyme
Location: 56536 - 57807 (+)
Gene ID: HRGMv2_2966_8_41
Type: CAZyme
Location: 57982 - 60489 (+)
Type: CAZyme
Location: 57982 - 60489 (+)
Gene ID: HRGMv2_2966_8_42
Type: pfam
Location: 60550 - 61245 (-)
Type: pfam
Location: 60550 - 61245 (-)
Gene ID: HRGMv2_2966_8_43
Type:
Location: 61579 - 62955 (-)
Type:
Location: 61579 - 62955 (-)
Gene ID: HRGMv2_2966_8_44
Type: TC
Location: 62969 - 64417 (-)
Type: TC
Location: 62969 - 64417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1696
Species
UMGS1696 sp900554225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2966_8_40 | vegan > omnivore | 1.28745 | 0.03783 |