PROTEIN: HRGMv2_2966_8_39
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Protein File & Metadata
Source:
HRGMv2_2966_8_39.pdb
Genome ID:
Protein ID:
HRGMv2_2966_8_39
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Protein Sequence
MSEDFDRLMR ALRLTDTAYC EDLRAIATEK TIEKGTRLSE SEKQNVMFLM SGLLRGYIID 60 KKGEEITDCF MRRYAEACTM DLSIVGFKAE MSIHVEALED TRLICFETCD VLPMLSRSPE 120 LLFVVNRAMT QNYIDLWKHK MILYRTTAME RYEWFLKDYP GLIDVVPHKY IASFLDMTPV 180 TLSRLRKTMF KDQLWIQ 197
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CB91-F1-model_v4 | 4 | 197 | 1 | 215 | 0.774 |
0.8588 |
| AF-K0EN49-F1-model_v4 | 3 | 197 | 1 | 215 | 0.7739 |
0.8544 |
| AF-P9WMH3-F1-model_v4 | 3 | 197 | 1 | 215 | 0.7739 |
0.8534 |
| AF-X8F361-F1-model_v4 | 4 | 197 | 1 | 215 | 0.7737 |
0.858 |
| AF-Q5F6H9-F1-model_v4 | 1 | 196 | 10 | 228 | 0.7692 |
0.8743 |
| AF-Q9I6L5-F1-model_v4 | 1 | 196 | 4 | 218 | 0.768 |
0.8508 |
| AF-P0A9E5-F1-model_v4 | 1 | 197 | 12 | 235 | 0.766 |
0.8745 |
| AF-P0A2T8-F1-model_v4 | 1 | 197 | 12 | 235 | 0.7655 |
0.874 |
| AF-Q32GJ6-F1-model_v4 | 1 | 197 | 12 | 235 | 0.7654 |
0.8738 |
| AF-A0A0H3GMU3-F1-model_v4 | 1 | 197 | 15 | 235 | 0.7652 |
0.8734 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-K8E695-F1-model_v4 | GT4 | 3 | 192 | 1 | 188 | 0.842 |
0.8884 |
| A0A0G9FC96 | GH1 | 2 | 194 | 1 | 199 | 0.6906 |
0.775 |
| AF-A0A170PFF2-F1-model_v4 | GT2 | 2 | 149 | 2 | 165 | 0.6519 |
0.8228 |
| WBX76463.1 | GT51 | 3 | 187 | 742 | 929 | 0.4954 |
0.8795 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K8E695 | GT4 | 3 | 192 | 1 | 188 | 0.842 |
0.8884 |
| A0A0G9FC96 | GH1 | 2 | 194 | 1 | 199 | 0.6906 |
0.775 |
| A0A170PFF2 | GT2 | 2 | 149 | 2 | 165 | 0.6519 |
0.8228 |
| WBX76463.1 | GT51 | 3 | 187 | 742 | 929 | 0.4954 |
0.8795 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2gau-assembly1.cif.gz_A-2 | 2 | 197 | 1 | 207 | 0.7769 |
0.8424 |
| 4cyd-assembly1.cif.gz_D | 4 | 196 | 1 | 210 | 0.7762 |
0.8507 |
| 4cyd-assembly2.cif.gz_A | 3 | 197 | 1 | 214 | 0.7744 |
0.8548 |
| 5e44-assembly1.cif.gz_A-2 | 2 | 196 | 1 | 216 | 0.7737 |
0.8621 |
| 8qto-assembly1.cif.gz_A-2 | 2 | 196 | 1 | 218 | 0.7729 |
0.8677 |
| 3i54-assembly2.cif.gz_C | 19 | 197 | 1 | 198 | 0.7555 |
0.8673 |
| 3e97-assembly1.cif.gz_A-2 | 1 | 194 | 3 | 202 | 0.7535 |
0.8375 |
| 3i54-assembly1.cif.gz_A | 1 | 197 | 1 | 216 | 0.7522 |
0.8246 |
| 4cyd-assembly2.cif.gz_C | 3 | 194 | 1 | 204 | 0.7521 |
0.8487 |
| 2xkp-assembly2.cif.gz_E | 11 | 194 | 1 | 192 | 0.7517 |
0.853 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29286-F1-model_v4 | 1 | 197 | 11 | 227 | 0.7826 |
0.8727 |
| AF-Q79VI7-F1-model_v4 | 2 | 197 | 1 | 218 | 0.7781 |
0.8602 |
| AF-Q01980-F1-model_v4 | 1 | 197 | 13 | 229 | 0.7752 |
0.8685 |
| AF-P9WMH2-F1-model_v4 | 3 | 197 | 1 | 215 | 0.7751 |
0.8556 |
| AF-P9WMH3-F1-model_v4 | 3 | 197 | 1 | 215 | 0.7739 |
0.8534 |
| AF-P23619-F1-model_v4 | 1 | 196 | 15 | 233 | 0.7718 |
0.8705 |
| AF-P0A9E5-F1-model_v4 | 1 | 197 | 12 | 235 | 0.766 |
0.8745 |
| AF-P0A9E6-F1-model_v4 | 1 | 197 | 12 | 235 | 0.766 |
0.8746 |
| AF-Q9AQ50-F1-model_v4 | 1 | 197 | 12 | 235 | 0.7656 |
0.874 |
| AF-P0A2T9-F1-model_v4 | 1 | 197 | 12 | 235 | 0.7655 |
0.8739 |