Cluster: HRGMv2_2954_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2954
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2954_38 | HRGMv2_2954_38_14 | 8295 | 9128 | - | 3.A.1.1.41 |
| TC | HRGMv2_2954_38 | HRGMv2_2954_38_15 | 9125 | 10057 | - | 3.A.1.1.36 |
| TC | HRGMv2_2954_38 | HRGMv2_2954_38_16 | 10179 | 11513 | - | 3.A.1.1.46 |
| TF | HRGMv2_2954_38 | HRGMv2_2954_38_17 | 11566 | 12366 | - | HTH_DeoR |
| CAZyme | HRGMv2_2954_38 | HRGMv2_2954_38_18 | 12467 | 13846 | - | GH4 |
Gene ID: HRGMv2_2954_38_14
Type: TC
Location: 8295 - 9128 (-)
Type: TC
Location: 8295 - 9128 (-)
Gene ID: HRGMv2_2954_38_15
Type: TC
Location: 9125 - 10057 (-)
Type: TC
Location: 9125 - 10057 (-)
Gene ID: HRGMv2_2954_38_16
Type: TC
Location: 10179 - 11513 (-)
Type: TC
Location: 10179 - 11513 (-)
Gene ID: HRGMv2_2954_38_17
Type: TF
Location: 11566 - 12366 (-)
Type: TF
Location: 11566 - 12366 (-)
Gene ID: HRGMv2_2954_38_18
Type: CAZyme
Location: 12467 - 13846 (-)
Type: CAZyme
Location: 12467 - 13846 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.