Cluster: HRGMv2_2954_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2954
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2954_23 | HRGMv2_2954_23_7 | 11475 | 12869 | - | 2.A.50.2.1 |
| pfam | HRGMv2_2954_23 | HRGMv2_2954_23_8 | 13341 | 13802 | - | DUF4358 |
| STP | HRGMv2_2954_23 | HRGMv2_2954_23_9 | 13910 | 14923 | - | Peptidase_M23 |
| TC | HRGMv2_2954_23 | HRGMv2_2954_23_10 | 15178 | 15588 | + | 3.A.11.1.4 |
| TC | HRGMv2_2954_23 | HRGMv2_2954_23_11 | 15604 | 17004 | + | 2.A.66.1.32 |
| pfam | HRGMv2_2954_23 | HRGMv2_2954_23_12 | 17076 | 18101 | - | ADH_zinc_N | ADH_N |
| CAZyme | HRGMv2_2954_23 | HRGMv2_2954_23_13 | 18291 | 19841 | - | GH13_44 |
Gene ID: HRGMv2_2954_23_7
Type: TC
Location: 11475 - 12869 (-)
Type: TC
Location: 11475 - 12869 (-)
Gene ID: HRGMv2_2954_23_8
Type: pfam
Location: 13341 - 13802 (-)
Type: pfam
Location: 13341 - 13802 (-)
Gene ID: HRGMv2_2954_23_9
Type: STP
Location: 13910 - 14923 (-)
Type: STP
Location: 13910 - 14923 (-)
Gene ID: HRGMv2_2954_23_10
Type: TC
Location: 15178 - 15588 (+)
Type: TC
Location: 15178 - 15588 (+)
Gene ID: HRGMv2_2954_23_11
Type: TC
Location: 15604 - 17004 (+)
Type: TC
Location: 15604 - 17004 (+)
Gene ID: HRGMv2_2954_23_12
Type: pfam
Location: 17076 - 18101 (-)
Type: pfam
Location: 17076 - 18101 (-)
Gene ID: HRGMv2_2954_23_13
Type: CAZyme
Location: 18291 - 19841 (-)
Type: CAZyme
Location: 18291 - 19841 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.