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Cluster: HRGMv2_2950_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2950_53 HRGMv2_2950_53_5 4992 6836 + 8.A.59.2.1
TC HRGMv2_2950_53 HRGMv2_2950_53_6 7231 8127 + 3.A.1.1.29
TC HRGMv2_2950_53 HRGMv2_2950_53_7 8152 9039 + 3.A.1.1.29
pfam HRGMv2_2950_53 HRGMv2_2950_53_8 9094 10125 + URO-D
NULL(UNKNOWN) HRGMv2_2950_53 HRGMv2_2950_53_9 10213 11223 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2950_53 HRGMv2_2950_53_10 11438 12556 + GH120
sulfatase HRGMv2_2950_53 HRGMv2_2950_53_11 12575 13468 + S1_7
NULL(UNKNOWN) HRGMv2_2950_53 HRGMv2_2950_53_12 13506 14567 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2950_53 HRGMv2_2950_53_13 14668 17319 - 8.A.7.1.5
Gene ID: HRGMv2_2950_53_5
Type: TC
Location: 4992 - 6836 (+)
Gene ID: HRGMv2_2950_53_6
Type: TC
Location: 7231 - 8127 (+)
Gene ID: HRGMv2_2950_53_7
Type: TC
Location: 8152 - 9039 (+)
Gene ID: HRGMv2_2950_53_8
Type: pfam
Location: 9094 - 10125 (+)
Gene ID: HRGMv2_2950_53_9
Type:
Location: 10213 - 11223 (+)
Gene ID: HRGMv2_2950_53_10
Type: CAZyme
Location: 11438 - 12556 (+)
Gene ID: HRGMv2_2950_53_11
Type: sulfatase
Location: 12575 - 13468 (+)
Gene ID: HRGMv2_2950_53_12
Type:
Location: 13506 - 14567 (+)
Gene ID: HRGMv2_2950_53_13
Type: TC
Location: 14668 - 17319 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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