PROTEIN: HRGMv2_2950_53_12
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2950_53_12.pdb
Genome ID:
Protein ID:
HRGMv2_2950_53_12
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MIHKSDRDWE ASRERFAALW RGEVLDRCCI AVTAPRDGAA APQPVCSSLE GKWFDPDCIY 60 RNEMARMESL AYYGDAFPCL SLNFGAGGNA AYYGSKPVLR PDTVWFDPCL EDPEDYETLE 120 MTDPFGMLQK QLEVAENLAA RSRGDYLVSM PDNCVAIDAL AHLRGSENLL CDMLTDPDEV 180 LAASAKLIEG WKKTTMAFHE AIGRHQDGNC IGWLTTYAPG LHAQVQCDLG AMISRDLVEK 240 FFLNELREAC RFLEYSLYHL DGIEQKRFLD LILSVPELKM IQWTSVDGQP PALASIESLR 300 AVQAAGKGLL LNLPAVYVKD VLEQLSPKGL YIVTTAPDES SAKALVDLAF RAR 353
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P95458-F1-model_v4 | 6 | 353 | 2 | 354 | 0.7164 |
0.7508 |
| AF-A0A0H3GQ14-F1-model_v4 | 6 | 353 | 2 | 354 | 0.7154 |
0.7486 |
| AF-P29680-F1-model_v4 | 6 | 353 | 2 | 354 | 0.7152 |
0.7486 |
| AF-Q32AH0-F1-model_v4 | 6 | 353 | 2 | 354 | 0.7152 |
0.7487 |
| AF-Q9L9I4-F1-model_v4 | 6 | 353 | 2 | 353 | 0.7144 |
0.7477 |
| AF-Q9PN54-F1-model_v4 | 13 | 351 | 1 | 340 | 0.7086 |
0.746 |
| AF-A0A175VUB7-F1-model_v4 | 6 | 353 | 7 | 370 | 0.7039 |
0.7534 |
| AF-A0A1C1CI81-F1-model_v4 | 6 | 350 | 6 | 363 | 0.7038 |
0.7512 |
| AF-C1GQK4-F1-model_v4 | 6 | 351 | 6 | 365 | 0.7035 |
0.7508 |
| AF-P32362-F1-model_v4 | 6 | 353 | 9 | 362 | 0.7032 |
0.7456 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ay8-assembly2.cif.gz_B | 7 | 350 | 2 | 340 | 0.7271 |
0.7648 |
| 3cyv-assembly1.cif.gz_A-2 | 6 | 353 | 1 | 352 | 0.7222 |
0.7529 |
| 2inf-assembly2.cif.gz_D | 6 | 353 | 1 | 343 | 0.7195 |
0.7534 |
| 6w2o-assembly1.cif.gz_A | 1 | 351 | 1 | 355 | 0.7183 |
0.7458 |
| 4zr8-assembly1.cif.gz_A | 6 | 353 | 1 | 352 | 0.7183 |
0.7502 |
| 4zr8-assembly1.cif.gz_B | 9 | 353 | 1 | 353 | 0.7178 |
0.7565 |
| 1j93-assembly1.cif.gz_A-2 | 10 | 353 | 1 | 343 | 0.7116 |
0.7439 |
| 4wsh-assembly1.cif.gz_B | 6 | 353 | 1 | 346 | 0.7111 |
0.7418 |
| 4wsh-assembly1.cif.gz_A | 6 | 353 | 3 | 354 | 0.7099 |
0.7447 |
| 3gw0-assembly1.cif.gz_A-2 | 6 | 353 | 2 | 355 | 0.7096 |
0.7449 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B5YK82-F1-model_v4 | 9 | 353 | 1 | 338 | 0.725 |
0.763 |
| AF-Q2JKH3-F1-model_v4 | 10 | 353 | 1 | 344 | 0.7195 |
0.7525 |
| AF-A7NKU6-F1-model_v4 | 10 | 353 | 1 | 350 | 0.7192 |
0.7579 |
| AF-A5UU35-F1-model_v4 | 9 | 351 | 1 | 348 | 0.7186 |
0.7559 |
| AF-A6GVN8-F1-model_v4 | 6 | 351 | 1 | 341 | 0.7176 |
0.7527 |
| AF-Q5WV12-F1-model_v4 | 6 | 353 | 1 | 352 | 0.7172 |
0.7492 |
| AF-Q5ZTY0-F1-model_v4 | 6 | 353 | 1 | 352 | 0.717 |
0.7492 |
| AF-C1DHQ1-F1-model_v4 | 6 | 353 | 2 | 354 | 0.7167 |
0.7514 |
| AF-A5IDL1-F1-model_v4 | 6 | 353 | 1 | 352 | 0.7167 |
0.7489 |
| AF-Q5X3M4-F1-model_v4 | 6 | 353 | 1 | 352 | 0.7167 |
0.7488 |