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Cluster: HRGMv2_2949_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2949_10 HRGMv2_2949_10_11 10328 11764 - 2.A.66.2.23
CAZyme HRGMv2_2949_10 HRGMv2_2949_10_12 11764 12750 - GT2
pfam HRGMv2_2949_10 HRGMv2_2949_10_13 12928 13839 - Indigoidine_A
TC HRGMv2_2949_10 HRGMv2_2949_10_14 13918 14862 - 3.A.1.2.17
TC HRGMv2_2949_10 HRGMv2_2949_10_15 14859 15980 - 3.A.1.2.10
TC HRGMv2_2949_10 HRGMv2_2949_10_16 15970 17514 - 3.A.1.2.12
NULL(UNKNOWN) HRGMv2_2949_10 HRGMv2_2949_10_17 17557 18741 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2949_10 HRGMv2_2949_10_18 18957 20030 - 3.A.1.2.17
Gene ID: HRGMv2_2949_10_11
Type: TC
Location: 10328 - 11764 (-)
Gene ID: HRGMv2_2949_10_12
Type: CAZyme
Location: 11764 - 12750 (-)
Gene ID: HRGMv2_2949_10_13
Type: pfam
Location: 12928 - 13839 (-)
Gene ID: HRGMv2_2949_10_14
Type: TC
Location: 13918 - 14862 (-)
Gene ID: HRGMv2_2949_10_15
Type: TC
Location: 14859 - 15980 (-)
Gene ID: HRGMv2_2949_10_16
Type: TC
Location: 15970 - 17514 (-)
Gene ID: HRGMv2_2949_10_17
Type:
Location: 17557 - 18741 (-)
Gene ID: HRGMv2_2949_10_18
Type: TC
Location: 18957 - 20030 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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