PROTEIN: HRGMv2_2949_10_17
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Protein File & Metadata
Source:
HRGMv2_2949_10_17.pdb
Genome ID:
Protein ID:
HRGMv2_2949_10_17
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Protein Sequence
MPAYYQIRSP LSQITEQHMT DYINAVSQAL GEKLERVSLE QYLAEDFALL YVASGGSEGY 60 FVQAFDQLKD RHCYILTSGE SNSLAASMEI LSFLNKHGGS GEILHGDIQQ IAEKIRLIAN 120 AHRAKAALKG KNLGVIGEPS DWLIACNYSP EAMMEKLGMG FVKIGMDELL AEIAKKEYPE 180 NQYTQAFKSK GYKPEEVEKA LQVYGAVKRL CQKYDLSAVT VRCFDLLDTV YTTGCLALSI 240 LNDEGICGGC ESDVPALLSM AVLGAVTGEP MFLCNPSRFD TKAGTAVFAH CTIPTTMLKN 300 FCLNTHFESG IGVAVQGSFE EGDCTIFKCE GDLSRWHAQE GHIIDTPFNN MLCRTQIKVC 360 LDDFSYFLTK PINNHHIICR GKHAAEIEAF FKLL 394
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132ZAR4-F1-model_v4 | 1 | 394 | 8 | 466 | 0.7721 |
0.8601 |
| AF-A0A0H3GN54-F1-model_v4 | 1 | 394 | 8 | 469 | 0.7605 |
0.865 |
| AF-P08202-F1-model_v4 | 1 | 394 | 8 | 469 | 0.7601 |
0.8645 |
| AF-Q32K31-F1-model_v4 | 1 | 394 | 8 | 469 | 0.7598 |
0.8642 |
| AF-P06189-F1-model_v4 | 1 | 394 | 8 | 469 | 0.7597 |
0.8642 |
| AF-Q8DN24-F1-model_v4 | 1 | 394 | 6 | 544 | 0.7259 |
0.8785 |
| AF-P44779-F1-model_v4 | 1 | 394 | 11 | 546 | 0.7233 |
0.8761 |
| AF-P69922-F1-model_v4 | 1 | 394 | 9 | 547 | 0.722 |
0.8757 |
| AF-Q8ZMC6-F1-model_v4 | 1 | 394 | 9 | 547 | 0.7205 |
0.874 |
| AF-Q32CB6-F1-model_v4 | 1 | 394 | 8 | 547 | 0.7205 |
0.8739 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4lql-assembly1.cif.gz_F | 1 | 394 | 8 | 466 | 0.77 |
0.858 |
| 4f2d-assembly1.cif.gz_A | 1 | 394 | 8 | 469 | 0.7639 |
0.8673 |
| 2ajt-assembly1.cif.gz_A | 1 | 394 | 8 | 469 | 0.7628 |
0.8661 |
| 7chl-assembly1.cif.gz_D | 1 | 394 | 7 | 468 | 0.7576 |
0.861 |
| 7cxo-assembly1.cif.gz_C | 1 | 394 | 6 | 458 | 0.7568 |
0.8523 |
| 4r1p-assembly1.cif.gz_C | 1 | 394 | 8 | 466 | 0.7566 |
0.8578 |
| 7cyy-assembly1.cif.gz_E | 1 | 394 | 7 | 462 | 0.7525 |
0.8518 |
| 7cyy-assembly1.cif.gz_D | 1 | 394 | 8 | 460 | 0.7516 |
0.8495 |
| 7ch3-assembly1.cif.gz_F | 1 | 394 | 8 | 464 | 0.751 |
0.8522 |
| 7cwv-assembly1.cif.gz_E | 1 | 394 | 8 | 464 | 0.7494 |
0.8505 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q03PR5-F1-model_v4 | 1 | 394 | 8 | 466 | 0.7784 |
0.8663 |
| AF-Q88S84-F1-model_v4 | 1 | 394 | 8 | 466 | 0.7756 |
0.8635 |
| AF-Q03XW2-F1-model_v4 | 1 | 394 | 8 | 466 | 0.7735 |
0.8614 |
| AF-Q03HQ0-F1-model_v4 | 1 | 394 | 8 | 466 | 0.7731 |
0.8609 |
| AF-Q65GC0-F1-model_v4 | 1 | 394 | 8 | 461 | 0.7727 |
0.8734 |
| AF-Q65J10-F1-model_v4 | 1 | 394 | 8 | 466 | 0.7724 |
0.8605 |
| AF-Q38UH2-F1-model_v4 | 1 | 394 | 8 | 466 | 0.7716 |
0.8593 |
| AF-Q5WL05-F1-model_v4 | 1 | 394 | 8 | 459 | 0.7713 |
0.8674 |
| AF-Q97JE4-F1-model_v4 | 1 | 394 | 8 | 466 | 0.7713 |
0.8684 |
| AF-Q8EMP4-F1-model_v4 | 1 | 394 | 8 | 466 | 0.7693 |
0.8574 |