Cluster: HRGMv2_2941_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2941
- CGC Family ID: CGCFAM_00172
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2941_2 | HRGMv2_2941_2_2 | 1132 | 1533 | - | 9.B.154.1.3 |
| TC | HRGMv2_2941_2 | HRGMv2_2941_2_3 | 1766 | 3019 | + | 2.A.49.9.2 |
| CAZyme | HRGMv2_2941_2 | HRGMv2_2941_2_4 | 3112 | 3825 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2941_2 | HRGMv2_2941_2_5 | 3822 | 5423 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2941_2 | HRGMv2_2941_2_6 | 5796 | 6647 | - | 3.A.1.121.4 |
| TC | HRGMv2_2941_2 | HRGMv2_2941_2_7 | 6861 | 8906 | - | 3.A.1.134.9 |
| TC | HRGMv2_2941_2 | HRGMv2_2941_2_8 | 8903 | 9667 | - | 3.A.1.134.4 |
Gene ID: HRGMv2_2941_2_2
Type: TC
Location: 1132 - 1533 (-)
Type: TC
Location: 1132 - 1533 (-)
Gene ID: HRGMv2_2941_2_3
Type: TC
Location: 1766 - 3019 (+)
Type: TC
Location: 1766 - 3019 (+)
Gene ID: HRGMv2_2941_2_4
Type: CAZyme
Location: 3112 - 3825 (+)
Type: CAZyme
Location: 3112 - 3825 (+)
Gene ID: HRGMv2_2941_2_5
Type:
Location: 3822 - 5423 (+)
Type:
Location: 3822 - 5423 (+)
Gene ID: HRGMv2_2941_2_6
Type: TC
Location: 5796 - 6647 (-)
Type: TC
Location: 5796 - 6647 (-)
Gene ID: HRGMv2_2941_2_7
Type: TC
Location: 6861 - 8906 (-)
Type: TC
Location: 6861 - 8906 (-)
Gene ID: HRGMv2_2941_2_8
Type: TC
Location: 8903 - 9667 (-)
Type: TC
Location: 8903 - 9667 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp004553495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2941_2_2 | vegetarian > vegan | 1.64444 | 0.01054 |